Factsheet for VIT_05s0020g03310.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 6
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034947	Potato	cytosol	15.92	69.59
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	64.14	64.24
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	63.21	63.81
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	62.91	63.4
KRG91287	Soybean	extracellular, golgi, vacuole	64.61	63.14
Solyc09g075940.2.1	Tomato	plasma membrane	62.29	62.87
HORVU0Hr1G009050.1	Barley	cytosol	17.77	61.83
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	61.82	60.79
KRH35530	Soybean	extracellular, plasma membrane	64.92	60.52
AT4G14940.1	Thale cress	extracellular, golgi	60.74	60.46
CDY50266	Canola	extracellular, golgi	60.12	59.85
Bra036916.1-P	Field mustard	extracellular, golgi	59.97	59.78
CDY54865	Canola	extracellular, golgi	59.81	59.54
GSMUA_Achr8P15520_001	Banana	cytosol, peroxisome, plastid	23.49	58.91
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	58.11	55.79
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	57.5	54.95
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	55.64	53.97
Os07t0572100-01	Rice	cytosol	36.17	52.47
Os06t0338700-00	Rice	cytosol	43.74	51.83
GSMUA_Achr9P11130_001	Banana	extracellular, vacuole	53.17	51.34
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	8.04	50.98
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	52.86	50.59
TraesCS4B01G282700.1	Wheat	extracellular	51.31	48.68
Os06t0338200-01	Rice	extracellular	51.78	47.99
TraesCS4A01G020900.1	Wheat	plastid	51.47	47.91
EES05551	Sorghum	extracellular	51.31	47.7
TraesCS4D01G281700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	51.93	47.66
Zm00001d006638_P001	Maize	mitochondrion	51.31	46.89
GSMUA_Achr8P15510_001	Banana	extracellular, golgi, vacuole	31.22	46.76
EER97410	Sorghum	extracellular, vacuole	50.85	46.34
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	49.3	45.38
OQU88787	Sorghum	extracellular	49.92	45.37
VIT_05s0094g01210.t01	Wine grape	cytosol	22.1	44.27
HORVU4Hr1G074620.2	Barley	extracellular	48.84	43.89
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	46.52	41.4
Os07t0572050-00	Rice	extracellular	14.99	35.79
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	20.4	32.35
VIT_00s0225g00090.t01	Wine grape	peroxisome	27.98	23.39
VIT_17s0000g09100.t01	Wine grape	peroxisome	26.89	22.0

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100256366	wikigene:100256366	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	ProteinID:CBI26238
ProteinID:CBI26238.3	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2
InterPro:Cu_amine_oxidase_N3	UniProt:D7T6W7	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	EntrezGene:LOC100256366	wikigene:LOC100256366
PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638
PANTHER:PTHR10638:SF40	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM	UniParc:UPI00015C76BB	ArrayExpress:VIT_05s0020g03310
EnsemblPlantsGene:VIT_05s0020g03310	EnsemblPlants:VIT_05s0020g03310.t01	RefSeq:XP_002278307	RefSeq:XP_002278307.2	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:D7T6W7]

Coordinates

chr5:-:5082857..5085083

Molecular Weight (calculated)

73459.8 Da

IEP (calculated)

9.337

GRAVY (calculated)

-0.347

Length

647 amino acids

Sequence
(BLAST)

001: MASIPFLALG LALQCCFIAS LPHPLDPLNP AEINHIRHII QKSHLVTLPN LTFHFVDVDD PEKRDVLKWL SSNKHNESFP RRAKVVVRAG GETRELVVDL
101: ATNSITSEHV YRGHGYPPFT YQELYQASQL PKKDPRFKNS ILRRGLNLSE VSCIPLTVGW FGELVAKRAL KIASFYRGGT VNIYARPIGG ISILIDVETM
201: QIIEYIDRFK TVVPPAKGSD YQSTKQKPSS FPCNETERGF TMEGHKVRWG NWMFHVGFNA RAGVIISTAS VYDAKQKRFR RVLYRGHVSE TFVPYMDPTS
301: EWYFRTFMDM GEYGFGRSAD TLEPLADCPG NAVYMDGYMA GADGRPQKVD RAICIFERHS GDVAWRHTEI GVPGRTIRRV EPEVNLVVRM VATVGNYDYV
401: LDWEFQQSGS IKVGVGLTGV LEMKATSYTN TDQIRKDVFG TLLADDIVAV NHDHFLTYYL DLDVDGMDNS FIKAKLGTRK TTSVGIKSPR KSYWSVVKKM
501: AKTEAEGRIR LGSKPAELLV VNTNKKTKTG NYVGYRLIAG QPVYSLLSDD DYPQIRVAYT KYQMWVTAYN KSERWAGGFY ADRSRGDDEL AVWSNRNRSI
601: ANKDVVVWYT VGFHHIPYQE DYPAMPTLHD GFQLRPANFF ERNPLLR

Best Arabidopsis Sequence Match ( AT4G14940.1 )
(BLAST)

001: MNTSILAILF LIQCVFTLGL HFHPLDPLTP QEINKTSFIV KKSHLGNLKD LTFHYLDLEE PNKSHVLQWL SPNPSKKPPP PRRRSFVVVR AGGQTYELII
101: DLTTSKIASS RIYTGHGFPS FTFIELFKAS KLPLTYPPFK KSILDRSLNI SEVSCIPFTV GWYGETTTRR ELKASCFYRD GSVNVFTRPI EGITVTIDVD
201: SMQVIKYSDR FRKPIPDKEG NDFRTKHRPF PFFCNVSDTG FKILGNRVKW ANWKFHVGFT ARAGVTISTA SVLDPRTKRF RRVMYRGHVS ETFVPYMDPT
301: YEWYYRTFMD IGEFGFGRSA VNLQPLIDCP QNAAFLDGHV AGPDGTAQKM TNVMCVFEKN GYGASFRHTE INVPGQVITS GEAEISLVVR MVATLGNYDY
401: IVDWEFKKNG AIRVGVDLTG VLEVKATSYT SNDQITENVY GTLVAKNTIA VNHDHYLTYY LDLDVDGNGN SLVKAKLKTV RVTEVNKTSS RRKSYWTVVK
501: ETAKTEADGR VRLGSDPVEL LIVNPNKKTK IGNTVGYRLI PEHLQATSLL TDDDYPELRA GYTKYPVWVT AYDRSERWAG GFYSDRSRGD DGLAVWSSRN
601: REIENKDIVM WYNVGFHHIP YQEDFPVMPT LHGGFTLRPS NFFDNDPLIG

Arabidopsis Description

AO1Primary amine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23349]
SUBAcon: [extracellular,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.