Factsheet for VIT_02s0025g04560.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	11.55	82.35
AT4G12280.1	Thale cress	cytosol	30.67	74.33
PGSC0003DMT400049076	Potato	extracellular	72.76	73.37
CDY04405	Canola	cytosol	25.58	73.23
TraesCS2A01G076300.1	Wheat	cytosol	45.25	72.63
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	71.8	72.4
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	59.7	71.97
KRH13980	Soybean	extracellular, golgi, vacuole	70.43	69.95
KRH32975	Soybean	extracellular, golgi, vacuole	69.6	68.94
AT4G12290.1	Thale cress	extracellular, plasma membrane	67.68	66.4
VIT_05s0094g01210.t01	Wine grape	cytosol	29.16	65.63
TraesCS2D01G075000.1	Wheat	golgi	64.92	64.39
TraesCS2B01G091300.1	Wheat	golgi	64.79	64.26
CDY04409	Canola	extracellular, plasma membrane	65.47	64.06
CDX97351	Canola	extracellular, plasma membrane	65.06	63.66
Bra018469.1-P	Field mustard	extracellular, plasma membrane	64.92	63.53
HORVU2Hr1G012710.4	Barley	extracellular	50.76	62.86
Zm00001d025103_P001	Maize	extracellular, golgi, vacuole	61.49	60.08
CDX97353	Canola	cytosol	33.56	59.8
EES10538	Sorghum	extracellular, golgi	61.76	59.71
AT4G12270.1	Thale cress	extracellular, vacuole	34.66	54.78
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	29.57	52.7
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	45.25	48.81
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	44.43	47.78
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	43.74	47.68
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	41.4	46.52
GSMUA_Achr8P19360_001	Banana	extracellular, golgi	21.05	46.5
Os04t0269600-01	Rice	extracellular, golgi	18.84	40.53
VIT_00s0225g00090.t01	Wine grape	peroxisome	28.2	26.49
VIT_17s0000g09100.t01	Wine grape	peroxisome	27.79	25.54

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100259834	wikigene:100259834	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	ProteinID:CCB58407
ProteinID:CCB58407.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2
InterPro:Cu_amine_oxidase_N3	UniProt:F6HUI4	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	EntrezGene:LOC100259834	wikigene:LOC100259834
PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638
PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	SUPFAM:SSF54416	TIGR:TC54043	TMHMM:TMhelix	UniParc:UPI00015CD21E
ArrayExpress:VIT_02s0025g04560	EnsemblPlantsGene:VIT_02s0025g04560	EnsemblPlants:VIT_02s0025g04560.t01	unigene:Vvi.8926	RefSeq:XP_002275872	RefSeq:XP_002275872.1
SEG:seg	:	:	:	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F6HUI4]

Coordinates

chr2:+:4110752..4113701

Molecular Weight (calculated)

81723.8 Da

IEP (calculated)

6.984

GRAVY (calculated)

-0.286

Length

727 amino acids

Sequence
(BLAST)

001: MEGRNLLRFL FFLVTGLFLL LFTWSNFPYL PSNKAELLDC TSFSPWCTSK SKPHLTTNPT NPTRGPRRHH SSDVPHHPLD PLTVQEINRV RTILSSHAPL
101: KASKRYTIHA VDLEEPAKPL VLRWKKGNPM LPRRASVIAL VGGESHLLTV DLATSQVTRD DVLPPSGYPT MTVEDMTTAT KAPLVDGNFN RTIIERGIDL
201: ADLACLPLST GWFGKSEEKR RLIKVQCYSL KDTVNFYMRP IEGLTVLVDL DSKQVVEISD RGQNIPIPNA ANTDYRYSAQ SKPTNLLNPI SIEQPKGPSF
301: TVENDHLIKW ANWEFHLKAE SRAGVIISRV MFRDPDTGLL RNVMYKGLTS EFFVPYMDPT DAWYFKTYMD AGEYGFGLQA MPLDPLNDCP RNAYYMDGVF
401: AAADGTPFVQ SNMICIFESY AGDIGWRHAE SPITGMGIRE VRPKVTLVVR MAASVANYDY IVDWVFQTDG LIRIKVGLSG ILMVKGTPYV NMNQVPGQEY
501: LYGTLLSENV IGVIHDHYLT FYLDMDVDGS DNSFVKVNLE KQMTANGESP RRSFLKATRK VAKTEKDAQI KFKLYEPAEF HVINPSKKTR VGNPVGYKVV
601: AGGTAASLLD HEDPPQKRGA FTNNQIWVTP YNRSEQWAGG LLVSQSQGDD NLAVWSDRNR PIENKDIVVW YTLGFHHIPC QEDFPVMPTV SSSFDLKPVN
701: FFESNPILRM PPNVENDLPI CKPDASA

Best Arabidopsis Sequence Match ( AT4G12290.1 )
(BLAST)

001: MDQKSFFRLI FLIVTAGFII SFTSTNFPHA PTRLLDCTDS SSSPLCASRN FLFNKQQPRP IPKHDPKPNT KNHDHVSDTP NHPLDPLTVS EINKIRSILS
101: SHALFTSGTP HALHTVVLEE PEKNLVRHWE KGNPLPPRKA SVIARVGADT HVLTVDISTG RVDSENSPVR VSGYPMMTIE EMNDITVVPF SNADFNRTII
201: SRGVNLTDVI CFPISCGWFG NKEENARVIK SQCFMTQGTP NFYMRPIEGL TILIDLDTKQ VIEITDTGRA IPIPGSTNTD YRFQKLATTD KTRPLNPISI
301: EQPRGPSFVI EDNHLVKWAN WEFHLKPDPR AGVVISRVRV HDPDTHETRD VMYKGFVSEL FVPYMDPSDA WYFKTYMDAG EYGFGLQAMP LVPLNDCPRN
401: AAYMDGVFAA ADGTPFVREN MVCIFESYAG DIGWRHSESP ITGIPIREVR PKVTLVVRMA ASVGNYDYII DYEFQTDGLI KAKVGLSGIL MVKGTTYQNK
501: NQVEKDKDGN EEELHGTLLS ENVIGVIHDH YVTFYLDLDV DGPDNSFVKV NLKRQETEPG ESPRKSYLKA VRNIAKTEKD GQIKLSLYDP SEFHVINSGK
601: TTRVGNPTGY KVVPRTTAAS LLDHDDPPQK RGAFTNNQIW VTPYNKSEQW AGGLFTYQSH GDDTLAVWSD RDRDIENKDI VVWYTLGFHH IPCQEDFPIM
701: PTVSSSFDLK PVNFFERNPI LSAAPNFEHD LPVCGVQSVS A

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L742]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.