CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018469.1-P	Field mustard	extracellular, plasma membrane	98.79	98.79
CDX97351	Canola	extracellular, plasma membrane	98.65	98.65
AT4G12290.1	Thale cress	extracellular, plasma membrane	86.14	86.37
CDY04405	Canola	cytosol	28.94	84.65
TraesCS2A01G076300.1	Wheat	cytosol	42.53	69.76
CDX97353	Canola	cytosol	37.95	69.12
PGSC0003DMT400049076	Potato	extracellular	64.74	66.71
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	53.43	65.84
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	64.06	65.47
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	63.53	65.46
KRH13980	Soybean	extracellular, golgi, vacuole	62.72	63.66
KRH32975	Soybean	extracellular, golgi, vacuole	62.58	63.35
CDX77547	Canola	cytosol	9.69	60.5
TraesCS2B01G091300.1	Wheat	golgi	59.62	60.44
TraesCS2D01G075000.1	Wheat	golgi	59.49	60.3
HORVU2Hr1G012710.4	Barley	extracellular	47.38	59.97
CDY69801	Canola	cytosol	12.79	59.75
CDY25701	Canola	cytosol	44.82	58.83
Zm00001d025103_P001	Maize	extracellular, golgi, vacuole	57.6	57.53
EES10538	Sorghum	extracellular, golgi	58.01	57.31
CDY32205	Canola	extracellular, vacuole	46.43	53.41
CDY53725	Canola	cytosol	4.17	52.54
CDY27138	Canola	cytosol	26.51	52.39
CDY53724	Canola	extracellular	7.94	47.97
CDY27135	Canola	cytosol	34.72	47.69
GSMUA_Achr8P19360_001	Banana	extracellular, golgi	19.38	43.77
CDY50266	Canola	extracellular, golgi	36.2	41.38
CDY54865	Canola	extracellular, golgi	35.94	41.08
Os04t0269600-01	Rice	extracellular, golgi	18.3	40.24
CDY56663	Canola	extracellular, golgi, vacuole	32.3	38.34
CDY47975	Canola	peroxisome	26.11	25.03
CDY14839	Canola	peroxisome, plastid	26.11	25.03
CDY35376	Canola	plastid	26.25	18.31
CDY22564	Canola	peroxisome, plastid	26.25	18.14

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	GO:A0A078EUY3	EnsemblPlants:CDY04409	ProteinID:CDY04409
ProteinID:CDY04409.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2
InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131
GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0048038	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00118418001
InterPro:IPR036460	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164	ScanProsite:PS01165
PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	MetaCyc:PWY-5751	SUPFAM:SSF49998	SUPFAM:SSF54416	TMHMM:TMhelix
UniParc:UPI0004EE86DE	:	:	:	:	:

Description

BnaC02g28390D

Coordinates

chrLK031953:+:545938..548658

Molecular Weight (calculated)

83398.8 Da

IEP (calculated)

6.099

GRAVY (calculated)

-0.372

Length

743 amino acids

Sequence
(BLAST)

001: MEPKNFFRLI FLIVTAGFII SFTSTNFPHA PSSTTGLLDC TDSSSSPLCA SRNFLFNKQK PQFSKQDPKP KPKNHDHLSD TLNHPLDPLT VMEFNKVRSL
101: LSSDALFSSG APHAFHSIVL EEPEKNLVRA WEKGNPLPPR KASVIARVGP DTHVLTVDLS SSRVDIVDSP VPVSGYPMMT LEEMNEVTFA PFSSADVNRT
201: IVSRGVNLTD VYCFPLSSGW YGRKEGNKRV IKSQCYSSQG TANFYMRPIE GLTILIDLDT KQVIEIVDTG PNIPIPGSAN TEYRFKNLGT TDKTRGLNPI
301: SIEQPRGPSF VIEDNHLVKW ANWEFHLKPD SRAGVVLSQV RVHDPDTQET REVMYQGFVS ELFVPYMDPS DAWYFKTYMD AGEYGFGLQA MPLVPLNDCP
401: RNAAYMDGVF TTADGTPFVR ENMICIFERY AGDIGWRHSE SPISGLPIKE VRPKVTLVVR MAASVGNYDY IIDYEFQTDG LIKTKVGLSG ILMVKGTSYQ
501: NKNQVNKDKE GNEEELHGTL LAENIIGVIH DHYVTFYLDL DVDGPDNSFL KVNLKRQMTE PGESPRKSYM KAVKNIVKTE KDAQIKLSLY DPSEFHVVNS
601: AKTTRVGNPT GYKIVPRATA ASLLDHDDPP QKRGAFTNNQ IWVTPYNKTE KWAAGLFTYQ SHGDDTLAVW SDRDRDIENT DIVVWYTLGF HHVPCQEDFP
701: IMPTVSSSFD LKPANFFERN PILRAAPNFE HDLPVCEAKY VSA

Best Arabidopsis Sequence Match ( AT4G12290.1 )
(BLAST)

001: MDQKSFFRLI FLIVTAGFII SFTSTNFPHA PTRLLDCTDS SSSPLCASRN FLFNKQQPRP IPKHDPKPNT KNHDHVSDTP NHPLDPLTVS EINKIRSILS
101: SHALFTSGTP HALHTVVLEE PEKNLVRHWE KGNPLPPRKA SVIARVGADT HVLTVDISTG RVDSENSPVR VSGYPMMTIE EMNDITVVPF SNADFNRTII
201: SRGVNLTDVI CFPISCGWFG NKEENARVIK SQCFMTQGTP NFYMRPIEGL TILIDLDTKQ VIEITDTGRA IPIPGSTNTD YRFQKLATTD KTRPLNPISI
301: EQPRGPSFVI EDNHLVKWAN WEFHLKPDPR AGVVISRVRV HDPDTHETRD VMYKGFVSEL FVPYMDPSDA WYFKTYMDAG EYGFGLQAMP LVPLNDCPRN
401: AAYMDGVFAA ADGTPFVREN MVCIFESYAG DIGWRHSESP ITGIPIREVR PKVTLVVRMA ASVGNYDYII DYEFQTDGLI KAKVGLSGIL MVKGTTYQNK
501: NQVEKDKDGN EEELHGTLLS ENVIGVIHDH YVTFYLDLDV DGPDNSFVKV NLKRQETEPG ESPRKSYLKA VRNIAKTEKD GQIKLSLYDP SEFHVINSGK
601: TTRVGNPTGY KVVPRTTAAS LLDHDDPPQK RGAFTNNQIW VTPYNKSEQW AGGLFTYQSH GDDTLAVWSD RDRDIENKDI VVWYTLGFHH IPCQEDFPIM
701: PTVSSSFDLK PVNFFERNPI LSAAPNFEHD LPVCGVQSVS A

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L742]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.