CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69801	Canola	cytosol	27.21	96.86
CDY32205	Canola	extracellular, vacuole	84.28	73.84
VIT_05s0094g01210.t01	Wine grape	cytosol	40.28	70.59
AT1G62810.1	Thale cress	extracellular, plasma membrane	85.69	68.12
CDY04405	Canola	cytosol	27.03	60.24
CDX77547	Canola	cytosol	11.66	55.46
CDY53725	Canola	cytosol	5.3	50.85
CDY27138	Canola	cytosol	32.16	48.4
CDX97353	Canola	cytosol	34.63	48.04
CDY53724	Canola	extracellular	10.07	46.34
CDY27135	Canola	cytosol	43.29	45.29
CDY04409	Canola	extracellular, plasma membrane	58.83	44.82
CDX97351	Canola	extracellular, plasma membrane	58.83	44.82
GSMUA_Achr1P19790_001	Banana	extracellular, vacuole	54.06	44.16
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	27.92	38.73
CDY50266	Canola	extracellular, golgi	40.81	35.54
CDY54865	Canola	extracellular, golgi	40.64	35.38
CDY56663	Canola	extracellular, golgi, vacuole	35.69	32.27
CDY14839	Canola	peroxisome, plastid	27.92	20.39
CDY47975	Canola	peroxisome	27.92	20.39
CDY35376	Canola	plastid	27.92	14.84
CDY22564	Canola	peroxisome, plastid	27.92	14.7

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	GO:A0A078GJZ6	UniProt:A0A078GJZ6	EnsemblPlants:CDY25701
ProteinID:CDY25701	ProteinID:CDY25701.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg
InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131
GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00033049001	InterPro:IPR036460	PFAM:PF01179	PFAM:PF02728	ScanProsite:PS01165
PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	MetaCyc:PWY-5751	SUPFAM:SSF49998	SUPFAM:SSF54416	UniParc:UPI0004EDB9F8

Description

BnaC03g69740DAmine oxidase [Source:UniProtKB/TrEMBL;Acc:A0A078GJZ6]

Coordinates

chrLK032179:+:187972..190453

Molecular Weight (calculated)

63940.2 Da

IEP (calculated)

5.886

GRAVY (calculated)

-0.331

Length

566 amino acids

Sequence
(BLAST)

001: MQVALKSIEF NRSVEARGVK LSDLVALPTF TGWFGPEEEG RRILKVQCFT SQDTPNYFMR PIEGLYATVD MDKLEVIKIV DKGMVPIPKA AGTEYRYNVQ
101: NKPVHMDRIN PISIEQPEGP SFLVEDGHLV KWANWVFHVK ADHRAGMIIS QATVRDSETE KPNSRILMFT NVERTGEPRS VMYKGFPSEL FVPYMDPGEL
201: WYYKSYLDAG EIGLGPAAMP LVPLNDCPRN AYYIDGVFAS PDGKAIVQPN MICLFERYAG DVSWRHSEIL IPSADIRESR PKVTLVARMA TSVGNYDYTF
301: DWEFQTDGLI RVTVAASGML MVKGTPYENV DDLGDKHDES GPLISENVIG VVHDHFITFH LDMDIDGPMN NSFVKVHLEK QRVPTGKSPR KSYLKVKKYV
401: AKTEKDAQIK LSLYDPYEFH IVNPNRKSRL GNPAGYRIIP GGNAVSLLDH DDPPQIRGAF SNNQIWVTRY NRSEQFAGGV LVYQSHGDDT LQVWSDRDRS
501: IENNDIVLWY TLGFHHIPCQ EDYPVMPTVA ASFELKPANF FESNPVIGVA PIFEKDLPVC RPFASS

Best Arabidopsis Sequence Match ( AT1G62810.1 )
(BLAST)

001: MAEPSFARLF LLFFSFLLIF ATYSWVFGPD SGFLFGTRVR KTLGSNRQVH VDHSLEKPHH PLDPLTVREI NRVRTILSNH DPGFGSGSAT IHSMALDEPE
101: KSRVVQWKKG NKLLSRRAAV VAYWGGQTHE ITVDLDSGRV VSDVINRTSG YPILTLNDVF AASQVPLKSL EFNRSIEARG VKFSDLACIT PFAGWFGSEE
201: EGRRVIRVQC FTLQGTTNYF MRPLEGLYVT VDLDKLEVIK IIDKGPIPIP KASGTEYRFG VQNKPVHMDR INPISMEQPD GPSFRVEDGH LVKWANWVFH
301: VKADQRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPEEGWYYK GYMDAGELGL GPTAMPLVPL NDCPRNSYYI DGVFASPDGK PIVQPNMICL
401: FERYAGDISW RHSEILFANA DIRESRPKVT LVARMATSVG NYDYIFDWEF QTDGLIRVTV AASGMLMVKG TPYDNVDDLG DREDDAGPLI SENVIGVVHD
501: HFITFHLDMD IDGPMNNSLV KVHLEKQRVP TGKSPRKSYL KVKKYIAKTE KDAQIKLSLY DPYEFHIVNP NRKSRVGNPA GYRIVPGGNA ASLLDHDDPP
601: QIRGAFTNNQ IWVTPYNRSE QYAGGVLIYQ SQGDDTLQVW SDRDRSIENK DIVLWYTLGF HHVPCQEDYP VMPTVAASFE LKPANFFESN PILGSAPFFE
701: KDLPVCRPFA SS

Arabidopsis Description

Primary amine oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1H9]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.