Factsheet for GSMUA_Achr1P19790_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69801	Canola	cytosol	14.43	62.89
VIT_05s0094g01210.t01	Wine grape	cytosol	25.69	55.11
CDY25701	Canola	cytosol	44.16	54.06
AT3G43670.1	Thale cress	extracellular, vacuole	52.24	52.69
GSMUA_Achr8P15520_001	Banana	cytosol, peroxisome, plastid	19.34	51.94
AT1G62810.1	Thale cress	extracellular, plasma membrane	52.09	50.7
Bra034523.1-P	Field mustard	extracellular, vacuole	51.8	50.42
CDY32205	Canola	extracellular, vacuole	46.03	49.38
GSMUA_Achr9P11130_001	Banana	extracellular, vacuole	42.71	44.18
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	42.86	43.87
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	24.1	40.93
GSMUA_Achr8P19360_001	Banana	extracellular, golgi	18.18	38.3
GSMUA_Achr8P15510_001	Banana	extracellular, golgi, vacuole	22.94	36.81
GSMUA_Achr6P06650_001	Banana	peroxisome	26.12	25.93
GSMUA_Achr10P...	Banana	peroxisome	26.41	25.81
GSMUA_Achr6P12170_001	Banana	peroxisome	26.7	23.04

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G19790_001	EnsemblPlants:GSMUA_Achr1P19790_001	EnsemblPlants:GSMUA_Achr1T19790_001
InterPro:IPR036460	UniProt:M0S1D7	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01165
PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002965D67	SEG:seg	:	:	:	:

Description

Primary amine oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr1G19790_001]

Coordinates

chr1:+:14851178..14854444

Molecular Weight (calculated)

76939.6 Da

IEP (calculated)

6.632

GRAVY (calculated)

-0.262

Length

693 amino acids

Sequence
(BLAST)

001: MEGFPSPKHL LLLLFTAALL LVSLSLRSFP TIRSLSSHRY SFRGGSTGTD GSGETLHVHK NPYHPLDPLT YNEIKAIRSI LASHPDFASP NTFPSIHSLS
101: LLEPEKAVVL AWRPGDTLPP RRALVVAYSA NHTHVLPVDI ASRSVLRHVV RARPAGYPSL TPEEMERATK AAAAHPDVIN AVFYRGLNPS SGVVCGPLAS
201: GWYGPEEENR RVIKVQCYAK SPNFYMSPVE GLTVTVDVDT GGVIRVSDQG LGIPVPRNRD TDYRYESQRR IPTTEAVAVN PMSMEQAGKP SMRVGAGGHA
301: GGGAWRDVMY KGMVSELFVP YMDPGEGWYF KTYMDAGEYG MGTNAFPLLR LNDCPRNAIY MDAVFAAADG TPFVRPDVVC VFERYEGDVA WRHTENPVSG
401: YDIREARPKV TLVARMVASV GNYDYTVDWE FQMDGLIRVK VSLSGMLMVK ATRYGNLSQV PEGEDLYGTL VADNIVGVVH DHFVTFYLDM DVDGPSNSFV
501: KVHMETQETA PGESPRKSYM KVVREVARTE EDAKVKLKLY DPSEFHVVNP SRLSKLGNPS GYKLVPGATA ASLLDLDDPP QKRAAFTNNQ IWVTPYNRSE
601: EWAGGLLAYQ SHGDDNLAVW SKRDRKIENK DIVLWYTMGF HHVPCQEDYP IMPTVFSTFD LKPVNFFRIN PIIRAAPYTE EDLPVCNGVH ATL

Best Arabidopsis Sequence Match ( AT4G12290.1 )
(BLAST)

001: MDQKSFFRLI FLIVTAGFII SFTSTNFPHA PTRLLDCTDS SSSPLCASRN FLFNKQQPRP IPKHDPKPNT KNHDHVSDTP NHPLDPLTVS EINKIRSILS
101: SHALFTSGTP HALHTVVLEE PEKNLVRHWE KGNPLPPRKA SVIARVGADT HVLTVDISTG RVDSENSPVR VSGYPMMTIE EMNDITVVPF SNADFNRTII
201: SRGVNLTDVI CFPISCGWFG NKEENARVIK SQCFMTQGTP NFYMRPIEGL TILIDLDTKQ VIEITDTGRA IPIPGSTNTD YRFQKLATTD KTRPLNPISI
301: EQPRGPSFVI EDNHLVKWAN WEFHLKPDPR AGVVISRVRV HDPDTHETRD VMYKGFVSEL FVPYMDPSDA WYFKTYMDAG EYGFGLQAMP LVPLNDCPRN
401: AAYMDGVFAA ADGTPFVREN MVCIFESYAG DIGWRHSESP ITGIPIREVR PKVTLVVRMA ASVGNYDYII DYEFQTDGLI KAKVGLSGIL MVKGTTYQNK
501: NQVEKDKDGN EEELHGTLLS ENVIGVIHDH YVTFYLDLDV DGPDNSFVKV NLKRQETEPG ESPRKSYLKA VRNIAKTEKD GQIKLSLYDP SEFHVINSGK
601: TTRVGNPTGY KVVPRTTAAS LLDHDDPPQK RGAFTNNQIW VTPYNKSEQW AGGLFTYQSH GDDTLAVWSD RDRDIENKDI VVWYTLGFHH IPCQEDFPIM
701: PTVSSSFDLK PVNFFERNPI LSAAPNFEHD LPVCGVQSVS A

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L742]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.