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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 5
  • extracellular 6
  • vacuole 4
  • plasma membrane 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69801 Canola cytosol 20.51 91.82
CDY25701 Canola cytosol 68.12 85.69
Bra034523.1-P Field mustard extracellular, vacuole 84.55 84.55
CDY32205 Canola extracellular, vacuole 75.42 83.13
AT3G43670.1 Thale cress extracellular, vacuole 74.44 77.15
VIT_05s0094g01210.t01 Wine grape cytosol 32.02 70.59
AT4G12280.1 Thale cress cytosol 27.67 65.67
AT4G12290.1 Thale cress extracellular, plasma membrane 57.44 55.2
VIT_00s1937g00010.t01 Wine grape extracellular, golgi 31.46 54.9
GSMUA_Achr1P19790_001 Banana extracellular, vacuole 50.7 52.09
AT1G31690.1 Thale cress extracellular 42.56 44.76
AT1G31710.1 Thale cress extracellular, golgi 41.85 43.76
AT4G14940.1 Thale cress extracellular, golgi 39.75 43.54
AT4G12270.1 Thale cress extracellular, vacuole 27.39 42.39
AT1G31670.1 Thale cress extracellular, plasma membrane 41.57 39.95
AT2G42490.1 Thale cress peroxisome 26.83 24.61
Protein Annotations
KEGG:00260+1.4.3.21KEGG:00350+1.4.3.21KEGG:00360+1.4.3.21KEGG:00410+1.4.3.21KEGG:00950+1.4.3.21KEGG:00960+1.4.3.21
Gene3D:2.70.98.20Gene3D:3.10.450.40MapMan:8.5.1EntrezGene:842580ProteinID:AAF19542.1ProteinID:AEE34008.1
ArrayExpress:AT1G62810EnsemblPlantsGene:AT1G62810RefSeq:AT1G62810TAIR:AT1G62810RefSeq:AT1G62810-TAIR-GEnsemblPlants:AT1G62810.1
TAIR:AT1G62810.1EMBL:AY149440Unigene:At.36219EMBL:BT004539InterPro:Cu_amine_oxidaseInterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sfInterPro:Cu_amine_oxidase_N-regInterPro:Cu_amine_oxidase_N2InterPro:Cu_amine_oxidase_N3GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005507GO:GO:0006809GO:GO:0007154GO:GO:0007165GO:GO:0008131
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009308GO:GO:0009719GO:GO:0009738
GO:GO:0009987GO:GO:0016491GO:GO:0046872GO:GO:0048038GO:GO:0052593GO:GO:0052594
GO:GO:0052595GO:GO:0052596GO:GO:0055114InterPro:IPR036460RefSeq:NP_176469.1PFAM:PF01179
PFAM:PF02727PFAM:PF02728PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281ScanProsite:PS01165PANTHER:PTHR10638PANTHER:PTHR10638:SF38UniProt:Q8H1H9
SUPFAM:SSF49998SUPFAM:SSF54416TMHMM:TMhelixUniParc:UPI00000483E6SEG:seg:
Description
Primary amine oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1H9]
Coordinates
chr1:-:23257610..23262002
Molecular Weight (calculated)
80142.4 Da
IEP (calculated)
6.389
GRAVY (calculated)
-0.300
Length
712 amino acids
Sequence
(BLAST)
001: MAEPSFARLF LLFFSFLLIF ATYSWVFGPD SGFLFGTRVR KTLGSNRQVH VDHSLEKPHH PLDPLTVREI NRVRTILSNH DPGFGSGSAT IHSMALDEPE
101: KSRVVQWKKG NKLLSRRAAV VAYWGGQTHE ITVDLDSGRV VSDVINRTSG YPILTLNDVF AASQVPLKSL EFNRSIEARG VKFSDLACIT PFAGWFGSEE
201: EGRRVIRVQC FTLQGTTNYF MRPLEGLYVT VDLDKLEVIK IIDKGPIPIP KASGTEYRFG VQNKPVHMDR INPISMEQPD GPSFRVEDGH LVKWANWVFH
301: VKADQRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPEEGWYYK GYMDAGELGL GPTAMPLVPL NDCPRNSYYI DGVFASPDGK PIVQPNMICL
401: FERYAGDISW RHSEILFANA DIRESRPKVT LVARMATSVG NYDYIFDWEF QTDGLIRVTV AASGMLMVKG TPYDNVDDLG DREDDAGPLI SENVIGVVHD
501: HFITFHLDMD IDGPMNNSLV KVHLEKQRVP TGKSPRKSYL KVKKYIAKTE KDAQIKLSLY DPYEFHIVNP NRKSRVGNPA GYRIVPGGNA ASLLDHDDPP
601: QIRGAFTNNQ IWVTPYNRSE QYAGGVLIYQ SQGDDTLQVW SDRDRSIENK DIVLWYTLGF HHVPCQEDYP VMPTVAASFE LKPANFFESN PILGSAPFFE
701: KDLPVCRPFA SS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.