Factsheet for AT4G12270.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
plastid 2
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G12290.1	Thale cress	extracellular, plasma membrane	67.61	41.97
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	53.26	40.63
GSMUA_Achr8P19360_001	Banana	extracellular, golgi	28.91	40.43
Os04t0269600-01	Rice	extracellular, golgi	27.61	37.57
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	55.65	35.51
PGSC0003DMT400049076	Potato	extracellular	55.65	35.51
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	54.78	34.66
KRH13980	Soybean	extracellular, golgi, vacuole	54.35	34.15
KRH32975	Soybean	extracellular, golgi, vacuole	53.26	33.38
TraesCS2D01G075000.1	Wheat	golgi	50.0	31.38
TraesCS2B01G091300.1	Wheat	golgi	49.78	31.24
Zm00001d025103_P001	Maize	extracellular, golgi, vacuole	47.17	29.17
EES10538	Sorghum	extracellular, golgi	47.39	28.99
AT3G43670.1	Thale cress	extracellular, vacuole	42.83	28.68
AT1G62810.1	Thale cress	extracellular, plasma membrane	42.39	27.39
TraesCS2A01G076300.1	Wheat	cytosol	23.7	24.06
HORVU2Hr1G012710.4	Barley	extracellular	30.0	23.51
AT1G31690.1	Thale cress	extracellular	33.48	22.75
AT4G14940.1	Thale cress	extracellular, golgi	30.87	21.85
CDX97353	Canola	cytosol	18.91	21.32
AT1G31710.1	Thale cress	extracellular, golgi	30.87	20.85
AT1G31670.1	Thale cress	extracellular, plasma membrane	33.04	20.51
AT2G42490.1	Thale cress	peroxisome	23.7	14.05
CDY04405	Canola	cytosol	3.7	6.69
AT4G12280.1	Thale cress	cytosol	1.52	2.33

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:35.1	EntrezGene:826835	ProteinID:AEE83109.1	ArrayExpress:AT4G12270
EnsemblPlantsGene:AT4G12270	RefSeq:AT4G12270	TAIR:AT4G12270	RefSeq:AT4G12270-TAIR-G	EnsemblPlants:AT4G12270.1	TAIR:AT4G12270.1
Unigene:At.54290	ProteinID:CAB45974.1	ProteinID:CAB78270.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	RefSeq:NP_192964.1	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	UniProt:Q9STI4	SUPFAM:SSF49998
SUPFAM:SSF54416	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000004893D	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q9STI4]

Coordinates

chr4:+:7297765..7299930

Molecular Weight (calculated)

51596.2 Da

IEP (calculated)

6.141

GRAVY (calculated)

-0.380

Length

460 amino acids

Sequence
(BLAST)

001: MEPKLSSRLF LLITTACFIL LFTSTNFSQA PSSTAKLFDC TKSSSSPFCA SRNFLFNKNT RPISKNIPKT KPKNHDHVSD TPNHPLDPLT VMEINKVRSI
101: LSSHALFASR VPHLLNSVVL EEPDKNLVRQ WEKGDQLPPR KASVIARVGG NSHLLIVDLS TSRVDQADSP VPESGYPIVT SEEMDSAASA PFSNADFNRT
201: INSRGVNLTD VICIPISSGW FGNKDDNTKR VTKIQCFSTQ DTPNFYMRPI EGLTLLFDLD TKRILEITDT GQSIPIPGST NTDYRYSTLP NHDKTRPLNT
301: ISLEQPRGPS FVIEDNHLVK WANWEFHLKP DPRAGLIMSQ VKIHDPDTQE TREVMYKGFV SELFVPYMDP SEAWYFKTYM DAGEYGFGLQ AMPLEPVAEP
401: KNLFIGPLND CPRNAVYMDG TFAAADGTPY VRENMICVFE SYAGDIAWRH TEYPVNGMPN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.