Factsheet for TraesCS2D01G075000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G091300.1	Wheat	golgi	97.0	97.0
TraesCS2A01G076300.1	Wheat	cytosol	57.84	93.6
HORVU2Hr1G012710.4	Barley	extracellular	65.89	82.28
Zm00001d025103_P001	Maize	extracellular, golgi, vacuole	81.99	80.78
EES10538	Sorghum	extracellular, golgi	82.67	80.59
AT4G12280.1	Thale cress	cytosol	29.74	72.67
CDY04405	Canola	cytosol	24.69	71.26
Os04t0269600-01	Rice	extracellular, golgi	31.79	68.93
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	64.39	64.92
PGSC0003DMT400049076	Potato	extracellular	62.07	63.11
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	51.43	62.52
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	60.71	61.72
AT4G12290.1	Thale cress	extracellular, plasma membrane	62.07	61.4
KRH13980	Soybean	extracellular, golgi, vacuole	61.12	61.2
KRH32975	Soybean	extracellular, golgi, vacuole	59.89	59.81
CDY04409	Canola	extracellular, plasma membrane	60.3	59.49
CDX97351	Canola	extracellular, plasma membrane	60.16	59.35
Bra018469.1-P	Field mustard	extracellular, plasma membrane	59.89	59.08
CDX97353	Canola	cytosol	32.2	57.84
GSMUA_Achr8P19360_001	Banana	extracellular, golgi	23.06	51.37
AT4G12270.1	Thale cress	extracellular, vacuole	31.38	50.0
TraesCS4D01G281700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	45.02	46.81
TraesCS6D01G191300.1	Wheat	peroxisome	26.74	26.03
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	27.01	25.55

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0048038
GO:GO:0055114	InterPro:IPR036460	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01165
PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	SUPFAM:SSF54416	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G075000
EnsemblPlants:TraesCS2D01G075000.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:32052027..32055968

Molecular Weight (calculated)

81122.7 Da

IEP (calculated)

7.495

GRAVY (calculated)

-0.311

Length

733 amino acids

Sequence
(BLAST)

001: MDYSTSLLRL TFLALGAALV LIVARSAFRL PLAIDAPAAS FLHGAGGCTR FSPWACRSPR TEKSTPRRPS HESDVPRHPL DPLTVTEVSR ARDLLRAHPP
101: FASAPSALAV HALALDEPDK PAVRRWRKGA HGLPPRRAVA VVRFQGESHV LAVDLAAGKV APLPVPASGY PTMTMDEQTA LCAAPFGDPA FNATIRRRGV
201: RLDDVACLPI SPGWYGPAED GGRRLIKSQC YSTEGTANFY MRPIEGLTVL VDMDTRKVVH ISDRGAGIPI PAAKNTDYRG AANDGTDRFG YQTVRAPSME
301: PAPEGPGFQI EDGHTVRWAG WEFHLKADAR AGLIVSHATV QDPATGARRE VMYKGMASEL FVPYMDPTEA WYFKTYMDAG EYGFGLQAMA LVPLNDCPRH
401: ARYMDGVFVA ADGRPYVREN MICVFERYAG DIAWRHSESP ITGMDIRESR PKVTLVARMA ASVANYDYIV DWEFQTDGLI RIKVGLSGIL MVKGTPYSHM
501: NQVRRNEEMH GTLLSENVIG VIHDHYVTFR LDMDVDGADN SFVRVDMARQ DTAPGESPRR SYLKATRHVA STEKDARVRL KLYEPAEFHV INPTKKTRVG
601: NPVGYKVVPA GTAGSLLDPE DPPQKRGAFT NNQIWVTPYN KSEEWAGGLF VYQSKGEDTL ATWSERDRPI ENKDLVLWYT LGFHHIPCQE DFPIMPTVSS
701: SFDLKPVNFF ESNPILKQRP TMEKDLPVCA ATA

Best Arabidopsis Sequence Match ( AT4G12290.1 )
(BLAST)

001: MDQKSFFRLI FLIVTAGFII SFTSTNFPHA PTRLLDCTDS SSSPLCASRN FLFNKQQPRP IPKHDPKPNT KNHDHVSDTP NHPLDPLTVS EINKIRSILS
101: SHALFTSGTP HALHTVVLEE PEKNLVRHWE KGNPLPPRKA SVIARVGADT HVLTVDISTG RVDSENSPVR VSGYPMMTIE EMNDITVVPF SNADFNRTII
201: SRGVNLTDVI CFPISCGWFG NKEENARVIK SQCFMTQGTP NFYMRPIEGL TILIDLDTKQ VIEITDTGRA IPIPGSTNTD YRFQKLATTD KTRPLNPISI
301: EQPRGPSFVI EDNHLVKWAN WEFHLKPDPR AGVVISRVRV HDPDTHETRD VMYKGFVSEL FVPYMDPSDA WYFKTYMDAG EYGFGLQAMP LVPLNDCPRN
401: AAYMDGVFAA ADGTPFVREN MVCIFESYAG DIGWRHSESP ITGIPIREVR PKVTLVVRMA ASVGNYDYII DYEFQTDGLI KAKVGLSGIL MVKGTTYQNK
501: NQVEKDKDGN EEELHGTLLS ENVIGVIHDH YVTFYLDLDV DGPDNSFVKV NLKRQETEPG ESPRKSYLKA VRNIAKTEKD GQIKLSLYDP SEFHVINSGK
601: TTRVGNPTGY KVVPRTTAAS LLDHDDPPQK RGAFTNNQIW VTPYNKSEQW AGGLFTYQSH GDDTLAVWSD RDRDIENKDI VVWYTLGFHH IPCQEDFPIM
701: PTVSSSFDLK PVNFFERNPI LSAAPNFEHD LPVCGVQSVS A

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L742]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.