Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04405 | Canola | cytosol | 69.67 | 82.28 |
| CDX97353 | Canola | cytosol | 70.0 | 51.47 |
| TraesCS2A01G076300.1 | Wheat | cytosol | 71.33 | 47.24 |
| AT4G12290.1 | Thale cress | extracellular, plasma membrane | 91.33 | 36.98 |
| HORVU2Hr1G012710.4 | Barley | extracellular | 71.67 | 36.63 |
| PGSC0003DMT400049076 | Potato | extracellular | 75.0 | 31.21 |
| VIT_02s0025g04560.t01 | Wine grape | extracellular, golgi, vacuole | 74.33 | 30.67 |
| KRH32975 | Soybean | extracellular, golgi, vacuole | 75.0 | 30.65 |
| Solyc08g079430.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 73.67 | 30.65 |
| KRH13980 | Soybean | extracellular, golgi, vacuole | 74.67 | 30.6 |
| TraesCS2D01G075000.1 | Wheat | golgi | 72.67 | 29.74 |
| TraesCS2B01G091300.1 | Wheat | golgi | 72.0 | 29.47 |
| EES10538 | Sorghum | extracellular, golgi | 71.67 | 28.59 |
| Zm00001d025103_P001 | Maize | extracellular, golgi, vacuole | 70.67 | 28.49 |
| AT3G43670.1 | Thale cress | extracellular, vacuole | 65.0 | 28.38 |
| AT1G62810.1 | Thale cress | extracellular, plasma membrane | 65.67 | 27.67 |
| PGSC0003DMT400010041 | Potato | extracellular, plasma membrane, vacuole | 52.0 | 25.87 |
| AT1G31690.1 | Thale cress | extracellular | 53.0 | 23.49 |
| AT4G14940.1 | Thale cress | extracellular, golgi | 46.0 | 21.23 |
| AT1G31710.1 | Thale cress | extracellular, golgi | 48.0 | 21.15 |
| AT1G31670.1 | Thale cress | extracellular, plasma membrane | 48.33 | 19.57 |
| AT2G42490.1 | Thale cress | peroxisome | 28.33 | 10.95 |
| AT4G12270.1 | Thale cress | extracellular, vacuole | 2.33 | 1.52 |
| GSMUA_Achr8P19360_001 | Banana | extracellular, golgi | 1.33 | 1.22 |
| Os04t0269600-01 | Rice | extracellular, golgi | 0.33 | 0.3 |
Protein Annotations
| Gene3D:2.70.98.20 | MapMan:8.5.1 | EntrezGene:826837 | ProteinID:AEE83110.1 | ArrayExpress:AT4G12280 | EnsemblPlantsGene:AT4G12280 |
| RefSeq:AT4G12280 | TAIR:AT4G12280 | RefSeq:AT4G12280-TAIR-G | EnsemblPlants:AT4G12280.1 | TAIR:AT4G12280.1 | Unigene:At.33486 |
| ProteinID:CAB45975.1 | ProteinID:CAB78271.1 | InterPro:Cu_amine_oxidase | InterPro:Cu_amine_oxidase_C | InterPro:Cu_amine_oxidase_C_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0008131 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009308 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0048038 | GO:GO:0055114 | InterPro:IPR036460 |
| RefSeq:NP_192965.1 | PFAM:PF01179 | ScanProsite:PS01164 | ScanProsite:PS01165 | PANTHER:PTHR10638 | PANTHER:PTHR10638:SF38 |
| UniProt:Q9STI3 | SUPFAM:SSF49998 | UniParc:UPI000004893E | : | : | : |
Description
Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q9STI3]
Coordinates
chr4:+:7301769..7302994
Molecular Weight (calculated)
33967.1 Da
IEP (calculated)
5.663
GRAVY (calculated)
-0.541
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: METPLREVRP KVTLVVRMVA SVGNYDYIID YEFQTDGVMR AKVGLSGMLM VKGTTYENKN QVKKDKEGNE EELYGTILSE NVIGVIHDHY VTFYLDLDVD
101: GPDNSFVKVN LKRQETAPGE SPRKSYMKAV RNIVKTEKDG QIKLSLYDPS EYHVINPGKT TRVGNPTGYK VVPRATAASL LDHDDPPQKR GAFTNNQIWV
201: TPYNKSEQWA SGLFTYQSHG DDTLAVWSDR DRDIENKDIV VWYTLGFHHI PCQEDFPIMP TVSSSFDLKP VNFFERNPIL KAAPNFEYDL PVCGAKSDSA
101: GPDNSFVKVN LKRQETAPGE SPRKSYMKAV RNIVKTEKDG QIKLSLYDPS EYHVINPGKT TRVGNPTGYK VVPRATAASL LDHDDPPQKR GAFTNNQIWV
201: TPYNKSEQWA SGLFTYQSHG DDTLAVWSDR DRDIENKDIV VWYTLGFHHI PCQEDFPIMP TVSSSFDLKP VNFFERNPIL KAAPNFEYDL PVCGAKSDSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.