CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
peroxisome 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025103_P001	Maize	extracellular, golgi, vacuole	92.69	93.68
TraesCS2A01G076300.1	Wheat	cytosol	51.73	85.87
TraesCS2D01G075000.1	Wheat	golgi	80.59	82.67
TraesCS2B01G091300.1	Wheat	golgi	80.59	82.67
HORVU2Hr1G012710.4	Barley	extracellular	58.78	75.3
AT4G12280.1	Thale cress	cytosol	28.59	71.67
Os04t0269600-01	Rice	extracellular, golgi	31.91	71.01
CDY04405	Canola	cytosol	23.8	70.47
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	59.71	61.76
PGSC0003DMT400049076	Potato	extracellular	59.04	61.58
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	48.94	61.03
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	58.51	61.03
AT4G12290.1	Thale cress	extracellular, plasma membrane	58.91	59.78
KRH13980	Soybean	extracellular, golgi, vacuole	57.98	59.56
KRH32975	Soybean	extracellular, golgi, vacuole	57.31	58.72
CDY04409	Canola	extracellular, plasma membrane	57.31	58.01
CDX97351	Canola	extracellular, plasma membrane	57.31	58.01
Bra018469.1-P	Field mustard	extracellular, plasma membrane	57.18	57.87
CDX97353	Canola	cytosol	31.38	57.84
GSMUA_Achr8P19360_001	Banana	extracellular, golgi	23.27	53.19
AT4G12270.1	Thale cress	extracellular, vacuole	28.99	47.39
EER97410	Sorghum	extracellular, vacuole	42.42	44.93
EES05551	Sorghum	extracellular	41.36	44.68
OQU88787	Sorghum	extracellular	39.63	41.85
OQU89852	Sorghum	cytosol	23.01	27.2
EES12364	Sorghum	peroxisome	26.2	25.19

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EntrezGene:8069427	UniProt:C5YDD2	ncoils:Coil
InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3
EnsemblPlants:EES10538	ProteinID:EES10538	ProteinID:EES10538.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	PFAM:PF01179	PFAM:PF02727
PFAM:PF02728	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	EnsemblPlantsGene:SORBI_3006G034400	SUPFAM:SSF49998
SUPFAM:SSF54416	unigene:Sbi.564	TMHMM:TMhelix	UniParc:UPI0001A86B9B	RefSeq:XP_002446210.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:9696690..9705320

Molecular Weight (calculated)

83750.8 Da

IEP (calculated)

6.436

GRAVY (calculated)

-0.335

Length

752 amino acids

Sequence
(BLAST)

001: MDHSTSLLRL IFLALGAALV LLIVRSAFRL PRGIDTPTTS LFDDATAGSS CTRFAPWGCR QADRIKQEQK PKPEPPSHEN DVPLHPLDPL TVTEINRARE
101: LLRAHPPFAS SPSSMFVHSL ALDEPDKPVV LSWRKGADPL PPRRAVAVVR FRGEAFVLAI DLASGAVTPL PAPASGYPTM TMDEQVSLCY APFSDPAFNA
201: TVQRHGVRMS DVACLPISLG WYGPTEENRR LIKIQCFSAE GTANFYMRPI EGLTVLLDMD TREVIRISDR GGGIPIPPAA NTDYRYARHM QEDVGGDQTT
301: SRSEAGFQKV RAPSMEPGPS SGPGVELVDG HTVRWGGWEF HLKADARAGM VVSRARVQDP GTGAHREVLY KGMASELFVP YMDPTEAWYF KTYMDAGEYG
401: FGLQAMPLVP LNDCPRHARY LDGVFVAADG RPYVREKMIC VFERYAGEVA WRHSESPITG MDIRESRPKV TLVARMVASV ANYDYIMDWE FQMDGLVRIK
501: VGLSGILMVK GTAYSHLREA RENEDTHGTL LSENVIGVIH DHYVTFRLDM DVDGADNNSF VRVEMARQET APGESPRRSY LKATRHVART EKDAQVRLKL
601: YDPAEFHVVN PTKKTRVGNP VGYKLVPAGT AASLLDPEDP PQKRGAFTNN QIWVTPYNKS EEWAGGLFVY QSKGEDTLAT WSERDRPIEN KDLVLWYTLG
701: FHHIPCQEDF PIMPTVSSSF DLKPVNFFES NPILKQRPTK EDDLPICSAT AV

Best Arabidopsis Sequence Match ( AT4G12290.1 )
(BLAST)

001: MDQKSFFRLI FLIVTAGFII SFTSTNFPHA PTRLLDCTDS SSSPLCASRN FLFNKQQPRP IPKHDPKPNT KNHDHVSDTP NHPLDPLTVS EINKIRSILS
101: SHALFTSGTP HALHTVVLEE PEKNLVRHWE KGNPLPPRKA SVIARVGADT HVLTVDISTG RVDSENSPVR VSGYPMMTIE EMNDITVVPF SNADFNRTII
201: SRGVNLTDVI CFPISCGWFG NKEENARVIK SQCFMTQGTP NFYMRPIEGL TILIDLDTKQ VIEITDTGRA IPIPGSTNTD YRFQKLATTD KTRPLNPISI
301: EQPRGPSFVI EDNHLVKWAN WEFHLKPDPR AGVVISRVRV HDPDTHETRD VMYKGFVSEL FVPYMDPSDA WYFKTYMDAG EYGFGLQAMP LVPLNDCPRN
401: AAYMDGVFAA ADGTPFVREN MVCIFESYAG DIGWRHSESP ITGIPIREVR PKVTLVVRMA ASVGNYDYII DYEFQTDGLI KAKVGLSGIL MVKGTTYQNK
501: NQVEKDKDGN EEELHGTLLS ENVIGVIHDH YVTFYLDLDV DGPDNSFVKV NLKRQETEPG ESPRKSYLKA VRNIAKTEKD GQIKLSLYDP SEFHVINSGK
601: TTRVGNPTGY KVVPRTTAAS LLDHDDPPQK RGAFTNNQIW VTPYNKSEQW AGGLFTYQSH GDDTLAVWSD RDRDIENKDI VVWYTLGFHH IPCQEDFPIM
701: PTVSSSFDLK PVNFFERNPI LSAAPNFEHD LPVCGVQSVS A

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L742]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.