CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006638_P001	Maize	mitochondrion	90.28	90.54
HORVU0Hr1G009050.1	Barley	cytosol	22.39	85.48
Os07t0572050-00	Rice	extracellular	30.7	80.44
TraesCS4B01G282700.1	Wheat	extracellular	76.76	79.91
TraesCS4D01G281700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	78.45	79.01
TraesCS4A01G020900.1	Wheat	plastid	77.04	78.7
Os07t0572100-01	Rice	cytosol	48.45	77.13
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	73.94	74.68
HORVU4Hr1G074620.2	Barley	extracellular	71.97	70.97
EES05551	Sorghum	extracellular	69.01	70.4
OQU88787	Sorghum	extracellular	65.63	65.45
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	58.17	61.0
PGSC0003DMT400034947	Potato	cytosol	12.54	60.14
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	46.34	50.85
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	45.07	49.54
Bra036916.1-P	Field mustard	extracellular, golgi	45.21	49.46
CDY54865	Canola	extracellular, golgi	45.21	49.38
CDY50266	Canola	extracellular, golgi	45.21	49.38
Solyc09g075940.2.1	Tomato	plasma membrane	44.37	49.14
AT4G14940.1	Thale cress	extracellular, golgi	44.93	49.08
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	44.23	48.99
KRG91287	Soybean	extracellular, golgi, vacuole	45.63	48.94
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	44.08	48.75
KRH35530	Soybean	extracellular, plasma membrane	45.77	46.83
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	43.1	46.5
EES10538	Sorghum	extracellular, golgi	44.93	42.42
OQU89852	Sorghum	cytosol	23.24	25.94
EES12364	Sorghum	peroxisome	27.46	24.94

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EntrezGene:8056374	UniProt:C5XCA6	InterPro:Cu_amine_oxidase
InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	EnsemblPlants:EER97410
ProteinID:EER97410	ProteinID:EER97410.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507
GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872
GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728
ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF59	EnsemblPlantsGene:SORBI_3002G347300	SUPFAM:SSF49998
SUPFAM:SSF54416	unigene:Sbi.7593	SignalP:SignalP-noTM	UniParc:UPI0001A83738	RefSeq:XP_002460889.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:71274474..71279160

Molecular Weight (calculated)

77313.1 Da

IEP (calculated)

6.022

GRAVY (calculated)

-0.231

Length

710 amino acids

Sequence
(BLAST)

001: MVQMSHRAAM LPLLLAAVLS VTAAASAASS RSNPHPLDPL TPEEITAVRD AVLASPLVPA RPLTFHYVGL DEPDKPDVLA YAYGGGGGSS SPRPLLPRRA
101: LVIARAGEQS HELRVDIASS SNGTTSATVL SHAIHRGAGF PILTLEEQFA AVALPPAYPP FVDSVRRRGV DMDDVLCAVF PVGWFGGGGG GDGTANKRVA
201: KMLCFVAGPT ANFYARPIEG VTMVVDLDAM AIVGYRDRVT YPVPKAEGTD YRAGKTGPPL AGLQPAPGVA VQPEGRGFHI DGHVVRWANW EFHVGFDMRA
301: GTVISLASVD DADAGTRRRV MYRGFVSEVF VPYMDPVEEW YYRTFLDAGE YGLGLWAFPL QPGADCPANA AYFDGSYAGQ DGKPVSGENR ICVFERYAGD
401: VAWRHTEAGF PDRLITEVRP DVTLVVRMVV SPGNYDYILD WEFKTSGSIK FVVSLTGLLE VKGTSYTHAD EITADPHGSL VSENTLAIYH DHYVTYHLDL
501: DIDGTNNSFV KNIITARRNT GDPATGGADT PRRSYWTVRR EVAETESDGQ ADVNADGPAD LLFVNPGKKT RMGHEVGYRL IPSGATAASV LADDDYPQRR
601: ASYTKKQVWV TPYSKAEKWA SGLYADQSTG GDSLTAWRRR NRGIRDEDIV LWYTLGLHHI PYQEDFPVMP TLSGGFELRP SNFFERNPIL RIRPPRPHSA
701: SANCSCDATW

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.