CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
peroxisome 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05551	Sorghum	extracellular	71.91	73.56
Os06t0338700-00	Rice	cytosol	55.06	71.79
Os06t0338200-01	Rice	extracellular	69.66	71.06
EER97410	Sorghum	extracellular, vacuole	65.45	65.63
PGSC0003DMT400034947	Potato	cytosol	13.2	63.51
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	53.65	56.43
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	45.37	49.92
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	44.1	48.99
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	43.96	48.75
Bra036916.1-P	Field mustard	extracellular, golgi	44.38	48.69
CDY50266	Canola	extracellular, golgi	44.38	48.62
CDY54865	Canola	extracellular, golgi	44.24	48.46
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	43.96	48.45
AT4G14940.1	Thale cress	extracellular, golgi	44.1	48.31
Solyc09g075940.2.1	Tomato	plasma membrane	43.4	48.21
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	44.24	47.87
KRG91287	Soybean	extracellular, golgi, vacuole	44.1	47.43
KRH35530	Soybean	extracellular, plasma membrane	44.24	45.39
EES10538	Sorghum	extracellular, golgi	41.85	39.63
OQU89852	Sorghum	cytosol	24.44	27.36
EES12364	Sorghum	peroxisome	27.95	25.45

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	UniProt:A0A1W0W332	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	EnsemblPlants:OQU88787
ProteinID:OQU88787	ProteinID:OQU88787.1	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164
ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF58	EnsemblPlantsGene:SORBI_3002G096000	SUPFAM:SSF49998	SUPFAM:SSF54416
SignalP:SignalP-noTM	UniParc:UPI0001A83EB5	RefSeq:XP_002461776.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:9988232..9993082

Molecular Weight (calculated)

78105.2 Da

IEP (calculated)

5.898

GRAVY (calculated)

-0.219

Length

712 amino acids

Sequence
(BLAST)

001: MFPIILSFVI AIISATTIDS ASSRPHPLDP LSASELTAVR AAVLASPAVP AHPLHFHYVG LDEPDKPEVL SYYASGADTT SSPTLRRRAF VIARAGGQSH
101: EFIVDVTDAS APSILSHAIH HDPGFPMLTS QDQAAATALL PQYPEPALWE GQQGRRCQYP PFVESLRRRG LNAGDVGCGL FSMGWFGDGE PTYGGARLAK
201: MQCFVRHMDG DATTTANVFA RPLDGVTLVV DLDRVAIVGY KDRVVKPVPK AEGTDYRADK LGPPFTGPDT VPGVVVQPEG SGICVDGHLV RWANWELHIG
301: FDMRAGTVIS LASVLDIDAG HRRRVLYRGF VSEIFVPYMD PEEEWYFHTF LDAGGYGLGV SASSLQRGAD CPAGNAVYFD GYYSDPDGRP VKAEDVICVF
401: ERYSGDIAWR HTGIAEQEVR PDVTLVVRMV ATIGNYDYIL DWEFKTSGTI KCVVSLTGIL VMKATSYTRV EQIREDAHGT LVAENTVGVY HDHFITYHLD
501: IDVDGTRNSF VKKTITPVRN TGNPATGGAD TPRKSYWTVR REVVETEVDG QAKLNGALPV ELLFINPGKK TNVGNEVGYR LVPAGATAAS LLADDDYPQR
601: RASYAKKQVW VTPYNKSEKW VPGLYAEQST GDDNLAAWSR SNRRIMDEDI VLWYTVGLHH IPYQEDFPVM PTVSGAFELR PSNFFDRNPL LRTRPPPRNG
701: YSPNCSCNVG SG

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.