Factsheet for PGSC0003DMT400081437

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	92.41	93.14
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	90.71	91.28
PGSC0003DMT400034947	Potato	cytosol	17.96	78.38
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	64.24	64.14
KRG91287	Soybean	extracellular, golgi, vacuole	61.61	60.12
KRH35530	Soybean	extracellular, plasma membrane	61.61	57.35
HORVU0Hr1G009050.1	Barley	cytosol	16.41	56.99
AT4G14940.1	Thale cress	extracellular, golgi	56.97	56.62
CDY50266	Canola	extracellular, golgi	56.5	56.15
CDY54865	Canola	extracellular, golgi	56.5	56.15
Bra036916.1-P	Field mustard	extracellular, golgi	56.35	56.09
GSMUA_Achr8P15520_001	Banana	cytosol, peroxisome, plastid	22.29	55.81
Os07t0572100-01	Rice	cytosol	35.91	52.02
PGSC0003DMT400044197	Potato	extracellular, golgi	51.39	50.76
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	51.55	50.68
Os06t0338700-00	Rice	cytosol	42.11	49.82
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	51.86	49.48
GSMUA_Achr9P11130_001	Banana	extracellular, vacuole	50.46	48.66
Os06t0338200-01	Rice	extracellular	51.08	47.28
TraesCS4B01G282700.1	Wheat	extracellular	49.38	46.77
Zm00001d006638_P001	Maize	mitochondrion	50.93	46.47
TraesCS4D01G281700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	49.85	45.67
TraesCS4A01G020900.1	Wheat	plastid	48.92	45.47
EES05551	Sorghum	extracellular	48.92	45.4
EER97410	Sorghum	extracellular, vacuole	49.54	45.07
GSMUA_Achr8P15510_001	Banana	extracellular, golgi, vacuole	29.41	43.98
OQU88787	Sorghum	extracellular	48.45	43.96
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	46.9	43.1
HORVU4Hr1G074620.2	Barley	extracellular	45.82	41.11
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	37.15	39.8
PGSC0003DMT400049076	Potato	extracellular	42.88	38.42
Os07t0572050-00	Rice	extracellular	14.55	34.69
PGSC0003DMT400069411	Potato	plastid	23.84	22.32
PGSC0003DMT400059626	Potato	peroxisome	26.78	22.01

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:102600413	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:M1D4S5
PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	EnsemblPlantsGene:PGSC0003DMG400031836	PGSC:PGSC0003DMG400031836	EnsemblPlants:PGSC0003DMT400081437
ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF40	SUPFAM:SSF49998	SUPFAM:SSF54416
SignalP:SignalP-noTM	UniParc:UPI0002952012	RefSeq:XP_015170079.1	:	:	:

Description

Primary amine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400031836]

Coordinates

chr9:-:53461166..53463662

Molecular Weight (calculated)

73726.0 Da

IEP (calculated)

7.287

GRAVY (calculated)

-0.254

Length

646 amino acids

Sequence
(BLAST)

001: MELIKVLHIS VAFFFLFFSI YCQCHPLDPL NPDEINKIRV IIQKSHLSNV TFHYVDLDEP EKNDVLHWLS SHKLQNASFP YRRARVVVRA NGESHELTLD
101: LVTSSIISQK LYLGHGFPPF TLNELIQSSI LPLSNPKFQE SISRRGLNIS EVSCIPLSVG WFGQVKTIRV LSVPCFYLGG TTNFWARPIE GITILVDVES
201: MKIIKYLDRF RSPLPEAKDA DFNSSSQGSV TCNETGSFRI NIQGHEVSWA NWKLHVGFNT RAGMIISTAS IFDAVRNEYR RVLYKGHVSE IFVPYMDPTF
301: EWYYRTFMDV GEFGFGRSAS TLVQSLDCPN NAVYMDGYMA DSVGQVVQVP RAICIFERYA GDAAWRHTEI GVPGTLNTKG QKEVNLVIRM VTTVGNYDYI
401: LDWEFKQSGS IKVGASLTGI MEMKAVKYTN HDQINQDVYG TLVAENTIAV NHDHFLTYRI DLDVDGSKNS FLKAKLKTTR VKDQKMSPRK SYWSVVKETM
501: KTESEGRTQL GIEAAELLFV NTEKKSKVGN DVGYKLIPSR PSMSLLTDDD YPQIRAAYTK YQLWVTPYNK SERWAAGFYA DRSHGDDGLT VWSGRNRSIE
601: KKDIVLWYTL GFHHVPCQED YPIMPTIYDA FELRPTNFFE RNPLLD

Best Arabidopsis Sequence Match ( AT4G14940.1 )
(BLAST)

001: MNTSILAILF LIQCVFTLGL HFHPLDPLTP QEINKTSFIV KKSHLGNLKD LTFHYLDLEE PNKSHVLQWL SPNPSKKPPP PRRRSFVVVR AGGQTYELII
101: DLTTSKIASS RIYTGHGFPS FTFIELFKAS KLPLTYPPFK KSILDRSLNI SEVSCIPFTV GWYGETTTRR ELKASCFYRD GSVNVFTRPI EGITVTIDVD
201: SMQVIKYSDR FRKPIPDKEG NDFRTKHRPF PFFCNVSDTG FKILGNRVKW ANWKFHVGFT ARAGVTISTA SVLDPRTKRF RRVMYRGHVS ETFVPYMDPT
301: YEWYYRTFMD IGEFGFGRSA VNLQPLIDCP QNAAFLDGHV AGPDGTAQKM TNVMCVFEKN GYGASFRHTE INVPGQVITS GEAEISLVVR MVATLGNYDY
401: IVDWEFKKNG AIRVGVDLTG VLEVKATSYT SNDQITENVY GTLVAKNTIA VNHDHYLTYY LDLDVDGNGN SLVKAKLKTV RVTEVNKTSS RRKSYWTVVK
501: ETAKTEADGR VRLGSDPVEL LIVNPNKKTK IGNTVGYRLI PEHLQATSLL TDDDYPELRA GYTKYPVWVT AYDRSERWAG GFYSDRSRGD DGLAVWSSRN
601: REIENKDIVM WYNVGFHHIP YQEDFPVMPT LHGGFTLRPS NFFDNDPLIG

Arabidopsis Description

AO1Primary amine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23349]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.