Factsheet for PGSC0003DMT400069411

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g071700.1.1	Tomato	plastid	95.94	85.53
PGSC0003DMT400059626	Potato	peroxisome	85.65	75.19
GSMUA_Achr6P06650_001	Banana	peroxisome	73.48	72.64
GSMUA_Achr10P...	Banana	peroxisome	74.06	72.07
VIT_17s0000g09100.t01	Wine grape	peroxisome	78.84	68.77
Os04t0476100-01	Rice	peroxisome	51.45	68.53
KRH54329	Soybean	plastid	75.22	67.05
TraesCS6D01G191300.1	Wheat	peroxisome	72.9	66.8
HORVU6Hr1G053060.2	Barley	peroxisome	72.17	66.67
TraesCS6A01G207600.3	Wheat	peroxisome	72.03	66.0
TraesCS6B01G236300.4	Wheat	cytosol	61.88	65.59
EES12364	Sorghum	peroxisome	73.77	65.09
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	73.33	64.87
OQU89852	Sorghum	cytosol	59.57	64.62
TraesCS2A01G327600.1	Wheat	golgi	72.03	64.46
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	72.32	64.39
TraesCS2B01G354400.1	Wheat	peroxisome	72.17	64.34
Os04t0136200-00	Rice	cytosol, peroxisome	56.38	63.46
HORVU2Hr1G082420.6	Barley	cytosol	53.77	62.77
GSMUA_Achr6P12170_001	Banana	peroxisome	71.88	61.77
Os02t0593100-00	Rice	cytosol	41.16	60.94
KRH03234	Soybean	nucleus	71.3	37.61
PGSC0003DMT400034947	Potato	cytosol	6.96	32.43
PGSC0003DMT400044197	Potato	extracellular, golgi	24.49	25.84
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	24.2	25.42
PGSC0003DMT400049076	Potato	extracellular	25.07	23.99
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	20.87	23.88
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	22.32	23.84
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	22.03	23.68

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:35.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:M1CKE9	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	EnsemblPlantsGene:PGSC0003DMG400026988	PGSC:PGSC0003DMG400026988	EnsemblPlants:PGSC0003DMT400069411	PANTHER:PTHR10638
PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416	UniParc:UPI0002966E7D	SEG:seg	:

Description

Methylputrescine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400026988]

Coordinates

chr6:-:52528939..52534812

Molecular Weight (calculated)

76412.0 Da

IEP (calculated)

6.557

GRAVY (calculated)

-0.355

Length

690 amino acids

Sequence
(BLAST)

001: MAETSQNVTP TPTTTAASFI PPPSVSVVRR ENTAVSAIDS VVVPSVDDQK EQTPAIASSK VIQIMHRAQT CHPLDPLTAA EISVAVATVR AAGDTPEVRD
101: GMRFVEVVLL EPDKTFVALA DAYFYPPFQS SLLPRTKGGL LVPSKLPPRR ARLIVYNKKT NETSIWIVQL TEAHAAARGG QHRGKVISSK VVPDVQPPMD
201: AQEYAECESV VKNYPPFIEA MKRRGIDDMY LVMVDPWCVG YHSEADAPSR RLAKPLVFCR AESDCPMENG YARPIEGIHV LVDVQIMQVI EFEDRKLVPL
301: LPADPLRNYT AGETRGGVDR SDVKPLQIIQ PEGPSFRVDG NYVQWQKWNF RVGFTPREGL VIHSVAYLDG SRGRRSIAHR LSFVEMVVPY GDPNDPHYRK
401: NAFDAGEDGL GKNAHSLKRD GKIEAEVKLT GILSLGALQP GESRKYGTTI SPGLYAPVHQ HFFVARINMA VDCKPGEAHN QVVEVNLKVE EPGKENVHNN
501: AFYAEETQLR SELQAMRDCD PLSARHWIVR NTRTSNRTGQ LTGYKLVPGQ NCLPLAGPEA KFLRRAAFLK HNLWVTQFAP GEDFPGGEFP NQNPRVGEGL
601: ASWVKEDRSL EESDIVLWYV FGITHVPRLE DWPVMPVEHI GFMLQPHGFF NCSPAIDVPP PRGCDLESKD SDASENGESK PTTTGLTAKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.