Factsheet for Os04t0476100-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	extracellular, nucleus, peroxisome
BaCelLo:	nucleus
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	extracellular, peroxisome
PProwler:	peroxisome
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0593100-00
Os04t0136200-00
Os04t0476100-01
Os08t0412700-01
Os08t0412800-01
Os08t0413100-00
Os08t0413200-00
Os08t0413500-00
Os10t0571300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42490.1	Os08t0412700-01	AT1G13520.1	21798944
AT2G42490.1	Os08t0412800-01	AT1G13520.1	21798944
AT2G42490.1	Os08t0413100-00	AT1G13520.1	21798944
AT2G42490.1	Os08t0413200-00	AT1G13520.1	21798944
AT2G42490.1	Os08t0413500-00	AT1G13520.1	21798944
AT2G42490.1	Os02t0593100-00	AT2G42490.1	21798944
AT2G42490.1	Os04t0136200-00	AT2G42490.1	21798944
AT2G42490.1	Os04t0476100-01	AT2G42490.1	21798944
AT2G42490.1	Os10t0571300-01	AT5G46570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G082420.6	Barley	cytosol	89.77	78.68
Os04t0136200-00	Rice	cytosol, peroxisome	84.56	71.45
Os02t0593100-00	Rice	cytosol	61.0	67.81
GSMUA_Achr6P06650_001	Banana	peroxisome	87.45	64.9
EES12364	Sorghum	peroxisome	96.91	64.19
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	96.53	64.1
TraesCS2A01G327600.1	Wheat	golgi	95.37	64.07
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	95.17	63.61
TraesCS2B01G354400.1	Wheat	peroxisome	94.98	63.57
GSMUA_Achr10P...	Banana	peroxisome	86.68	63.33
KRG99420	Soybean	plastid	87.07	59.03
KRH45608	Soybean	mitochondrion	87.07	58.88
KRH69629	Soybean	peroxisome	86.29	58.82
AT2G42490.1	Thale cress	peroxisome	87.07	58.12
VIT_00s0225g00090.t01	Wine grape	peroxisome	85.91	57.49
CDY47975	Canola	peroxisome	85.71	57.29
CDY14839	Canola	peroxisome, plastid	85.71	57.29
VIT_17s0000g09100.t01	Wine grape	peroxisome	87.07	57.02
Solyc05g013440.2.1	Tomato	peroxisome, plastid	85.33	56.96
KRH74530	Soybean	cytosol	33.4	56.72
Solyc06g071700.1.1	Tomato	plastid	83.98	56.2
KRH54329	Soybean	plastid	83.98	56.2
PGSC0003DMT400059626	Potato	peroxisome	84.94	55.98
GSMUA_Achr6P12170_001	Banana	peroxisome	86.68	55.92
Bra016871.1-P	Field mustard	plastid	84.75	55.78
Solyc08g014330.2.1	Tomato	peroxisome, plastid	84.36	55.46
PGSC0003DMT400069411	Potato	plastid	68.53	51.45
CDY35376	Canola	plastid	85.52	41.6
CDY22564	Canola	peroxisome, plastid	85.91	41.4
KRH03234	Soybean	nucleus	79.54	31.5
Os07t0572100-01	Rice	cytosol	24.13	28.03
Os06t0338700-00	Rice	cytosol	27.61	26.19
Os06t0338200-01	Rice	extracellular	28.38	21.06
Os07t0572050-00	Rice	extracellular	5.21	9.96
Os04t0269600-01	Rice	extracellular, golgi	5.02	7.69

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	ProteinID:BAF14992.1	ProteinID:BAS89689.1	ProteinID:BAS89690.1
InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152
GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460
EnsemblPlantsGene:Os04g0476100	EnsemblPlants:Os04t0476100-01	PFAM:PF01179	PFAM:PF02728	PANTHER:PTHR10638	PANTHER:PTHR10638:SF18
UniProt:Q0JCE5	SUPFAM:SSF49998	SUPFAM:SSF54416	UniParc:UPI0000DD911E	SEG:seg	:

Description

DIAMINE OXIDASE 4Similar to Peroxisomal copper-containing amine oxidase. (Os04t0476100-01);Similar to OSIGBa0106G07.12 protein. (Os04t0476100-02);Similar to OSIGBa0106G07.12 protein. (Os04t0476100-03)

Coordinates

chr4:-:23829930..23832791

Molecular Weight (calculated)

58730.0 Da

IEP (calculated)

7.058

GRAVY (calculated)

-0.426

Length

518 amino acids

Sequence
(BLAST)

001: DAPSRRLGKP LIFCRTDSDS PMENGYARPV EGIHVIVDMQ NNVVIEFEDR KLVPLPPPDH LRNYTPGETR GGVDRSDLKP LIINQPEGPS FRINGYFVEW
101: QKWNFRIGFT PKEGLVIYSV AYVDGSRGRR PIAHRLSFVE MVVPYGDPNE PHYRKNAFDA GEDGLGKNAH SLKRGCDCLG FIKYFDAHFT NFTGGVETIE
201: NCVCLHEEDH GILWKHQDWR TGLAEVRRSR RLTVSFICTV ANYEYGFYWH FYQDGKIEAE VKLTGILSLG ALMPGESRKY GTTIAPGLYA PVHQHFFVAR
301: MDMAVDCKPN EAHNQVVEVN VKVENAGTHN VHNNAFYAEE KLLKSELQAM RDCDPSSARH WIVRNTRAVN RTGQPTGYRL VPGSNCLPLA LPEAKFLRRA
401: GFLKHNLWVT QYKSDEVFPG GEFPNQNPRI HEGLATWVKK DRPLEETDIV LWYVFGLTHI PRLEDWPVMP VERIGFMLMP HGFFNCSPAV DVPPGSSDAD
501: IKEAESPKAI QNGLISKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.