Factsheet for Solyc05g013440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
peroxisome 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc05g010460.2.1
Solyc05g010470.2.1
Solyc05g013440.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42490.1	Solyc05g010460.2.1	AT1G13520.1	21798944
AT2G42490.1	Solyc05g010470.2.1	AT1G13520.1	21798944
AT2G42490.1	Solyc05g013440.2.1	AT2G42490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P06650_001	Banana	peroxisome	76.93	85.53
Os04t0476100-01	Rice	peroxisome	56.96	85.33
GSMUA_Achr10P...	Banana	peroxisome	76.42	83.64
KRH45608	Soybean	mitochondrion	82.09	83.16
KRH69629	Soybean	peroxisome	81.44	83.16
KRG99420	Soybean	plastid	81.7	82.98
TraesCS6B01G236300.4	Wheat	cytosol	67.27	80.18
Os02t0593100-00	Rice	cytosol	47.81	79.61
TraesCS6D01G191300.1	Wheat	peroxisome	77.19	79.55
HORVU6Hr1G053060.2	Barley	peroxisome	76.29	79.25
TraesCS6A01G207600.3	Wheat	peroxisome	76.42	78.75
CDY47975	Canola	peroxisome	78.35	78.45
CDY14839	Canola	peroxisome, plastid	78.22	78.32
TraesCS2A01G327600.1	Wheat	golgi	77.58	78.08
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	77.71	77.81
EES12364	Sorghum	peroxisome	78.35	77.75
AT2G42490.1	Thale cress	peroxisome	77.71	77.71
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	78.09	77.69
TraesCS2B01G354400.1	Wheat	peroxisome	77.45	77.65
OQU89852	Sorghum	cytosol	63.4	77.36
Os04t0136200-00	Rice	cytosol, peroxisome	61.08	77.32
HORVU2Hr1G082420.6	Barley	cytosol	58.76	77.16
Bra016871.1-P	Field mustard	plastid	77.84	76.75
Solyc08g014330.2.1	Tomato	peroxisome, plastid	77.32	76.14
Solyc06g071700.1.1	Tomato	plastid	75.52	75.71
GSMUA_Achr6P12170_001	Banana	peroxisome	75.52	72.98
CDY35376	Canola	plastid	77.58	56.53
CDY22564	Canola	peroxisome, plastid	77.58	56.0
Solyc09g090490.1.1	Tomato	vacuole	22.68	27.98
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	22.68	27.46
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	23.2	27.36
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	25.39	27.32
Solyc09g075940.2.1	Tomato	plasma membrane	22.55	27.3

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0007275	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0009653
GO:GO:0009791	GO:GO:0010311	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
InterPro:IPR036460	UniProt:K4BY65	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	PANTHER:PTHR10638
PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416	EnsemblPlantsGene:Solyc05g013440.2	EnsemblPlants:Solyc05g013440.2.1	UniParc:UPI0002765EC1
SEG:seg	:	:	:	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:K4BY65]

Coordinates

chr5:-:6501962..6511458

Molecular Weight (calculated)

86302.8 Da

IEP (calculated)

6.814

GRAVY (calculated)

-0.310

Length

776 amino acids

Sequence
(BLAST)

001: MASAQEKTTV SAPSRNASAA SETEWNAGGT VTDVSDLSST RSASSAAPST LTAVIDSIDR PSAQNQQPAV KGLPTLLRAQ THHPLDPLTA AEISVAVATV
101: RAAGSTPEVR DSMRFVEVVL VEPDKSVVAL ADAYFFPPFQ PSLLPRTKGG PVIPSKLPPR KAKLIVYNKK SNETSIWIVE LSQVHAVTRG GHHRGKVISS
201: KVVPDIQPPM DAVEYAECEA VVKDFPPFRD AMKKRGIDDM DLVMVDAWCA GYFSDADAPN RRLGKPLIFC RTESDCPMEN GYARPVEGIH IVVDMQNMVV
301: IEFEDRKVVP LPPADPLRNY TAGETRGGVD RSDVKPLLIV QPEGPSFRVN GHFVEWQKWN FRIGFTPREG LVIYSVAYID GSRGRRPVAH RLSFIEMVVP
401: YGDPNEPHYR KNAFDAGEDG LGKNAHSLKK GCDCLGYIKY FDAHFTNFTG GVETIENCVC LHEEDHGILW KHQDWRTGLA EVRRSRRLTV SFICTVANYE
501: YGFYWHFYQD GKIEAEVKLT GILSLGALLP GEVRKYGTTI APGLYAPVHQ HFFVARMDMA VDCKSGESHN QVVEVNARVE PPGENNVHNN AFYAEERLLR
601: TELEAMRDCN PLTARHWIIR NTRTVNRTGQ LTGYKLVPGS NCLPLAGSEA KFLRRAAFLK HNLWVTPYSR EEMFPGGEFP NQNPRVGEGL ATWVQQNRSL
701: EETQIVLWYI FGLIHVPRLE DWPVMPVEHI GFMLQPHGFF NCSPAVDVPP SMSDSDIKEN GTVAKSCHND GVMSKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.