Factsheet for Bra016871.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016728.1-P
Bra016871.1-P
Bra025014.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42490.1	Bra016728.1-P	AT1G13520.1	21798944
AT2G42490.1	Bra016871.1-P	AT2G42490.1	21798944
AT2G42490.1	Bra025014.1-P	AT5G46570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47975	Canola	peroxisome	95.3	96.77
CDY14839	Canola	peroxisome, plastid	95.17	96.65
AT2G42490.1	Thale cress	peroxisome	90.72	92.01
Bra000260.1-P	Field mustard	plastid	90.09	89.97
Os04t0476100-01	Rice	peroxisome	55.78	84.75
GSMUA_Achr6P06650_001	Banana	peroxisome	75.1	84.67
GSMUA_Achr10P...	Banana	peroxisome	74.71	82.93
KRH45608	Soybean	mitochondrion	78.78	80.94
KRG99420	Soybean	plastid	78.4	80.76
KRH69629	Soybean	peroxisome	77.38	80.13
TraesCS6B01G236300.4	Wheat	cytosol	66.07	79.88
Os02t0593100-00	Rice	cytosol	47.01	79.4
TraesCS6D01G191300.1	Wheat	peroxisome	75.48	78.88
TraesCS6A01G207600.3	Wheat	peroxisome	75.22	78.62
HORVU6Hr1G053060.2	Barley	peroxisome	74.59	78.58
Solyc05g013440.2.1	Tomato	peroxisome, plastid	76.75	77.84
TraesCS2A01G327600.1	Wheat	golgi	75.86	77.43
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	76.24	77.42
TraesCS2B01G354400.1	Wheat	peroxisome	76.11	77.39
HORVU2Hr1G082420.6	Barley	cytosol	57.94	77.16
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	76.37	77.05
EES12364	Sorghum	peroxisome	76.49	76.98
Os04t0136200-00	Rice	cytosol, peroxisome	59.85	76.84
OQU89852	Sorghum	cytosol	61.5	76.1
GSMUA_Achr6P12170_001	Banana	peroxisome	73.95	72.48
Bra014912.1-P	Field mustard	cytosol	4.7	31.09
Bra038431.1-P	Field mustard	cytosol	13.85	28.99
Bra038432.1-P	Field mustard	cytosol	19.95	28.24
Bra034523.1-P	Field mustard	extracellular, vacuole	24.14	26.69
Bra018469.1-P	Field mustard	extracellular, plasma membrane	24.9	26.38
Bra036916.1-P	Field mustard	extracellular, golgi	21.09	25.58
Bra000259.1-P	Field mustard	cytosol	0.89	2.45

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	EnsemblPlantsGene:Bra016871	EnsemblPlants:Bra016871.1	EnsemblPlants:Bra016871.1-P
InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0007275	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152
GO:GO:0009308	GO:GO:0009653	GO:GO:0009791	GO:GO:0010311	GO:GO:0016491	GO:GO:0046872
GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:M4DK43	PFAM:PF01179	PFAM:PF02728
PANTHER:PTHR10638	PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416	UniParc:UPI0002543AA9	:

Description

AT2G42490 (E=0.0) | copper amine oxidase, putative

Coordinates

chrA04:-:17803285..17807198

Molecular Weight (calculated)

87681.7 Da

IEP (calculated)

7.122

GRAVY (calculated)

-0.330

Length

787 amino acids

Sequence
(BLAST)

001: MASASKTASV CAHGGGGFAP SPKLVSAVAN TRSVGSSESD DRRDSKVAVD SVVRPVDSMP DTAKKPANKG ISVMPMPRTE TKHPLDPLSA AEISVAVATV
101: RAAGANPEVR DSMRFIEVAS VEPEKNVVAL ADAYFFPPFQ PSLLPRTKAG PVIPMRLPPR RAKLVVYNKK SNETSVWIVE LSEVHAVTRG GHHRGRVVSS
201: EVIPDVQPPM DAAEYAECEA IVKDFPPFIE AMKRRGIDDM DLVMVDPWCV GYHSEADAPS RRLAKPLIYC RTDSDSPMEN GYARPVEGIY VLVDMQNMVV
301: IEFEDRKFVP LPPPDPLRNY TPGESRGGVD RSDVKPLQII QPEGPSFRVR GYFVEWQKWN FRIGFTPREG LVIHSVAYVD GSRGRRPVAH RLSFVEMVVP
401: YGDPNEPHYR KNAFDAGEDG LGKNAHSLKK GCDCLGTIKY FDAHFTNFTG GVETIENCVC LHEEDHGILW KHQDWRTGLA EVRRSRRLTV SFLCTVANYE
501: YGFYWHFYQD GKIEAEVKLT GILSLGALQP GETRKYGTTI APGLYAPVHQ HFFIARMDMS VDCKPGEAFN QVSLLCCLLT HGIFSVSRNG IGENNIHNNA
601: FYAEEKLLRS EAEAMRDCDP FSARHWIVRN TRTVNRTGQL TGYKLVPGSN CLPLARPEAK FLRRAAFLKH NLWVTRYDPE EKFPGGEFPN QNPRSGEGLA
701: TWVKQNRSLE ESDVVLWYVF GIIHVPRLED WPVMPVEHIG FTLMPHGFFN CSPAVDVPPN PACELETKDS EVKEVVAAPK PGLLSKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.