Factsheet for Bra034523.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32205	Canola	extracellular, vacuole	90.17	99.38
AT1G62810.1	Thale cress	extracellular, plasma membrane	84.55	84.55
VIT_05s0094g01210.t01	Wine grape	cytosol	31.88	70.28
Bra014912.1-P	Field mustard	cytosol	9.27	55.46
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	30.62	53.43
Bra018469.1-P	Field mustard	extracellular, plasma membrane	54.35	52.09
GSMUA_Achr1P19790_001	Banana	extracellular, vacuole	50.42	51.8
Bra038431.1-P	Field mustard	cytosol	25.56	48.4
Bra038432.1-P	Field mustard	cytosol	36.24	46.4
Bra036916.1-P	Field mustard	extracellular, golgi	38.48	42.22
Bra000260.1-P	Field mustard	plastid	27.11	24.49
Bra016871.1-P	Field mustard	plastid	26.69	24.14
Bra000259.1-P	Field mustard	cytosol	0.28	0.7

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EnsemblPlantsGene:Bra034523	EnsemblPlants:Bra034523.1	EnsemblPlants:Bra034523.1-P
InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0006809	GO:GO:0007154
GO:GO:0007165	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009308
GO:GO:0009719	GO:GO:0009738	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038
GO:GO:0055114	InterPro:IPR036460	UniProt:M4F0C9	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728
ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	SUPFAM:SSF54416	TMHMM:TMhelix
UniParc:UPI000253E58C	SEG:seg	:	:	:	:

Description

AT1G62810 (E=0.0) | copper amine oxidase, putative

Coordinates

chrScaffold000096:-:848080..852002

Molecular Weight (calculated)

79577.0 Da

IEP (calculated)

6.073

GRAVY (calculated)

-0.243

Length

712 amino acids

Sequence
(BLAST)

001: MAEPSLARLS ALFFGFLLLL ATYSWVPRLH SGFLSGTGVQ KTLGPDPKLR VDHSSAKPHH PLDPLTVQEI ERVRTILLDH EPGFGSGSAT IHSMALDEPD
101: KTLVVKWKKG NRLPSRRAEV LALSVGQSHV IVVDLDSGRV VSDVVNPTSG YPILTMDDLI VASQVALKSI EFNRSVEARG VKLSDLVALP TFTGWFGPEE
201: EGRRILKVQC FTSQDTPNYF MRPIEGLYAT VDMDKLEVIK IVDKGMVPIP KAAGTEYRYN VQNKPVHMDR INPISIEQPE GPSFLVEDGH LVKWANWVFH
301: VKADHRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPGELWYYK SYLDAGEIGL GPAAMPLVPL NDCPRNAYYI DGVFASPDGK AIVQPNMICL
401: FERYAGDVSW RHSEILIPNA DIRESRPKVT LVARMATSVG NYDYTFDWEF QTDGLIRVTV AASGMLMVKG TPYENVDDLG DKEDDSGPLI SENVIGVVHD
501: HFITFHLDMD IDGPMNNSFV KVHLEKQRVQ SGKSPRKSYL KVKKYVAKTE KDAQIKLSLY DPYEFHIVNP NRKSRLGNPA GYRIIPGGNA VSLLDHDDPP
601: QIRGAFSNNQ IWVTRYNRSE QFAGGVLVYQ SHGDDTLQVW SDRDRSIENN DIVLWYTLGF HHIPCQEDYP VMPTVAASFE LKPANFFESN PVIGVAPIFE
701: KDLPVCRPFA SS

Best Arabidopsis Sequence Match ( AT1G62810.1 )
(BLAST)

001: MAEPSFARLF LLFFSFLLIF ATYSWVFGPD SGFLFGTRVR KTLGSNRQVH VDHSLEKPHH PLDPLTVREI NRVRTILSNH DPGFGSGSAT IHSMALDEPE
101: KSRVVQWKKG NKLLSRRAAV VAYWGGQTHE ITVDLDSGRV VSDVINRTSG YPILTLNDVF AASQVPLKSL EFNRSIEARG VKFSDLACIT PFAGWFGSEE
201: EGRRVIRVQC FTLQGTTNYF MRPLEGLYVT VDLDKLEVIK IIDKGPIPIP KASGTEYRFG VQNKPVHMDR INPISMEQPD GPSFRVEDGH LVKWANWVFH
301: VKADQRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPEEGWYYK GYMDAGELGL GPTAMPLVPL NDCPRNSYYI DGVFASPDGK PIVQPNMICL
401: FERYAGDISW RHSEILFANA DIRESRPKVT LVARMATSVG NYDYIFDWEF QTDGLIRVTV AASGMLMVKG TPYDNVDDLG DREDDAGPLI SENVIGVVHD
501: HFITFHLDMD IDGPMNNSLV KVHLEKQRVP TGKSPRKSYL KVKKYIAKTE KDAQIKLSLY DPYEFHIVNP NRKSRVGNPA GYRIVPGGNA ASLLDHDDPP
601: QIRGAFTNNQ IWVTPYNRSE QYAGGVLIYQ SQGDDTLQVW SDRDRSIENK DIVLWYTLGF HHVPCQEDYP VMPTVAASFE LKPANFFESN PILGSAPFFE
701: KDLPVCRPFA SS

Arabidopsis Description

Primary amine oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1H9]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.