Factsheet for VIT_05s0094g01210.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69801	Canola	cytosol	33.44	67.92
CDY25701	Canola	cytosol	70.59	40.28
AT1G62810.1	Thale cress	extracellular, plasma membrane	70.59	32.02
Bra034523.1-P	Field mustard	extracellular, vacuole	70.28	31.88
AT3G43670.1	Thale cress	extracellular, vacuole	67.18	31.59
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	39.63	31.37
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	65.63	29.16
CDY32205	Canola	extracellular, vacuole	56.66	28.33
GSMUA_Achr1P19790_001	Banana	extracellular, vacuole	55.11	25.69
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	48.3	23.15
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	47.06	22.79
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	47.06	22.49
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	44.27	22.1
VIT_00s0225g00090.t01	Wine grape	peroxisome	27.55	11.5
VIT_17s0000g09100.t01	Wine grape	peroxisome	27.86	11.38
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	0.0	0.0

Protein Annotations

Gene3D:2.70.98.20	MapMan:8.5.1	ProteinID:CCB49420	ProteinID:CCB49420.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	UniProt:F6HB33	EMBL:FN595507	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	PFAM:PF01179	PANTHER:PTHR10638
PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	UniParc:UPI0002109871	ArrayExpress:VIT_05s0094g01210	EnsemblPlantsGene:VIT_05s0094g01210	EnsemblPlants:VIT_05s0094g01210.t01

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F6HB33]

Coordinates

chr5:-:24507261..24509135

Molecular Weight (calculated)

36431.4 Da

IEP (calculated)

6.049

GRAVY (calculated)

-0.352

Length

323 amino acids

Sequence
(BLAST)

001: MEPINPISME QPKGPSFRVE DGHTVKWANW ELHLKADQRA GMIISQAKVR DSETGELRSV MYKGFASEMF VPYMDPDEAW YFKSYMDAGE FGLGGTALAL
101: VPLNDCPRNS YYMDGVFVAS DGKPLIQSNM ICVFARYTGD VGWRHSETFL PGFNIREARP NVTLVARIAA SVGNYDYIFD WEFQTDGLIR VKVGLSGMLM
201: VKGTPLENIH QAPNQDDMSG TLVSENVIGV VHDHFITFHL DLDIDNTDNS FVKVNLVKEE TLTGQSPRKS YLKAKRNVAA TENDAKIKLK LYDPSEFHVI
301: NPLKRSRLGN SAWIQDCPQW HRG

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.