Factsheet for VIT_05s0020g03280.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	87.83	88.76
Bra014912.1-P	Field mustard	cytosol	13.35	75.63
CDX77547	Canola	cytosol	13.35	75.63
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	68.25	68.05
Bra038431.1-P	Field mustard	cytosol	37.24	66.76
CDY27138	Canola	cytosol	37.24	66.76
CDY27135	Canola	cytosol	53.26	66.36
KRG91286	Soybean	nucleus	66.62	66.32
CDY53725	Canola	cytosol	5.79	66.1
Bra038432.1-P	Field mustard	cytosol	54.45	66.01
KRG91283	Soybean	extracellular	65.73	65.63
KRG91282	Soybean	extracellular	65.43	65.33
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	9.35	61.76
AT1G31690.1	Thale cress	extracellular	61.87	61.6
AT1G31710.1	Thale cress	extracellular, golgi	60.83	60.21
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.79	58.11
CDY53724	Canola	extracellular	10.53	57.72
CDY56663	Canola	extracellular, golgi, vacuole	51.63	55.59
AT1G31670.1	Thale cress	extracellular, plasma membrane	60.39	54.93
VIT_05s0094g01210.t01	Wine grape	cytosol	23.15	48.3
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	48.81	45.25
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	22.11	36.52
VIT_17s0000g09100.t01	Wine grape	peroxisome	30.42	25.92
VIT_00s0225g00090.t01	Wine grape	peroxisome	29.23	25.45

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100244323	wikigene:100244323	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	ProteinID:CBI26235
ProteinID:CBI26235.3	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2
InterPro:Cu_amine_oxidase_N3	UniProt:D7T6W4	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	EntrezGene:LOC100244323	wikigene:LOC100244323
PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638
PANTHER:PTHR10638:SF36	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM	UniParc:UPI00015C76B8	ArrayExpress:VIT_05s0020g03280
EnsemblPlantsGene:VIT_05s0020g03280	EnsemblPlants:VIT_05s0020g03280.t01	RefSeq:XP_002278244	RefSeq:XP_002278244.1	SEG:seg	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:D7T6W4]

Coordinates

chr5:+:5055644..5058990

Molecular Weight (calculated)

76243.8 Da

IEP (calculated)

6.551

GRAVY (calculated)

-0.294

Length

674 amino acids

Sequence
(BLAST)

001: MASLVQHLGL FLLFFLPLSL VSCHSHHHPL DSLTPSEFRQ VQAIVNGSNP GSSHNVTFQY VGLDEPDKPA LLSWLSNPNS TTLPPPRRAF VITRLHSQTH
101: EIIVDLSTQS IVSDKVYSGH GYPLLTSEEQ TAASELPLTY PPFIASIRKR KLKLSDVVCS TFTVGWFGEE KSRRVLKILC FYTDGTANLY MRPIEGVTIV
201: VDLDEMKITE YHDRLTVPMP EAEGTEYRLS KQKPPFGPRL NGVSSMQPDG PGFKIDGHNI RWANWDFHVS FDARAGLIIS LASIYDLQKR TFRRVLYRGY
301: LSELFVPYMD PTEEWYYKTF FDLGEFGFGL CTVPLQPLAD CPSNAVFMDG YYAGQDGKPV KISNAFCIFE QQAGRIMWRH TEVEIPGEEI REVRPEVSLV
401: VRMVATVGNY DYILDWEFKP SGSIKLGVGL TGILEVKGVS YTHTSQIKED VYGTLLAHNT IGVNHDHFLT YHLDLDVDGD ANSFVKANLE TKRVKDNISP
501: RKSYWTVVSE TAKTESDAQI QLGLKPAELI VVNPNKKTKL GNYVGYRLIP GSLSSPLLSD DDYPQIRGAF TKYDVWITPY NKSEKWAGGL YMDQSRGDDT
601: LAVWSQRNRE IENKDIVLWY TIGFHHVPCQ EDFPVMPTLS GGFELRPTNF FERNPVLKTK PPTYGHWPNC TTKP

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.