CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91283	Soybean	extracellular	83.31	83.56
Bra014912.1-P	Field mustard	cytosol	12.7	72.27
CDX77547	Canola	cytosol	12.7	72.27
CDY53725	Canola	cytosol	5.91	67.8
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	66.32	66.62
KRG91282	Soybean	extracellular	66.32	66.52
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	64.99	65.97
Bra038431.1-P	Field mustard	cytosol	36.04	64.89
CDY27138	Canola	cytosol	36.04	64.89
CDY27135	Canola	cytosol	48.15	60.26
Bra038432.1-P	Field mustard	cytosol	49.34	60.07
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	59.53	59.62
AT1G31690.1	Thale cress	extracellular	58.49	58.49
PGSC0003DMT400044197	Potato	extracellular, golgi	56.43	58.41
KRH70957	Soybean	extracellular, plasma membrane	58.05	58.05
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	56.28	57.99
KRH02147	Soybean	nucleus	57.02	57.27
AT1G31710.1	Thale cress	extracellular, golgi	57.16	56.83
KRH75095	Soybean	nucleus	56.28	56.7
Solyc09g090490.1.1	Tomato	vacuole	52.29	56.28
CDY53724	Canola	extracellular	10.04	55.28
KRH50986	Soybean	cytosol	18.61	55.26
AT1G31670.1	Thale cress	extracellular, plasma membrane	57.61	52.63
KRG91287	Soybean	extracellular, golgi, vacuole	51.11	52.27
CDY56663	Canola	extracellular, golgi, vacuole	48.01	51.92
KRH35530	Soybean	extracellular, plasma membrane	50.81	49.57
KRH13980	Soybean	extracellular, golgi, vacuole	48.15	44.54
KRH32975	Soybean	extracellular, golgi, vacuole	48.01	44.28
KRH45608	Soybean	mitochondrion	31.46	27.81
KRH69629	Soybean	peroxisome	30.87	27.5
KRG99420	Soybean	plastid	31.02	27.49
KRH54329	Soybean	plastid	30.28	26.49
KRH74530	Soybean	cytosol	9.9	21.97
KRH03234	Soybean	nucleus	30.58	15.83

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100800090	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EMBL:ACUP02012674	InterPro:Cu_amine_oxidase
InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	EnsemblPlantsGene:GLYMA_20G145300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150
GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
UniProt:I1NGE0	InterPro:IPR036460	EnsemblPlants:KRG91286	ProteinID:KRG91286	ProteinID:KRG91286.1	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF36
SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM	UniParc:UPI000233E1D1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:38379457..38383241

Molecular Weight (calculated)

76405.7 Da

IEP (calculated)

7.182

GRAVY (calculated)

-0.334

Length

677 amino acids

Sequence
(BLAST)

001: MDTTMKVMLS FILMLLWSCV ECKNHPHPQD PLTPSEFNDV RTIVQNAYPT SHNLTFHYVA LDEPNKSELL SWLSSNPKTK PTPSSPPPPR RAFAIVRSQK
101: QSHEITVDLS TRSIVSTKVY EGNGYPMLTL GEIAVATRLP FSYEPFKESV TKRGLNISLV RCNAYSFGWF GEAKTVRSVK IKCHYRNGTT NFYARPLEGV
201: AVLVDFDNMK IVGYNDRYVV PVPKAEGTEY RASKLEPPFG PKLKGIAFKQ DGGPGFTIDG HSVSWANWVF HVGFDIRAGL VISQASIYDL QKQKYRPVLY
301: KGFVSELFVP YQDPSEEWYY ATFFDSGEYG LGQYMSSLQP LTDCPPNAEF IDAYYASSDG TPVKISNAFC IFEKYAGDIM WRHTEVGIPD EVITEVRSDV
401: SLVVRMVSTV ANYDYVIDWE FKPSGSIKSV VGLTGILGLK AGTYTNTDQI KEDIYGTLIA DNTIGIYHDH FFTYYLDLDI DGEANSFVKS NLETVRVKDD
501: TTPRKSYWTV VSETAKTEAD AKINLGSKPS QLLVVNPNKK SKQGNKIGYR LLPGPAARPL LLNDDYPQIR AAFTNYDVWV TPYNKSEKWV GGLYVDRSRG
601: DDTLAVWSRR NRKIENKDIV LWYTMGFHHV PCQEDFPVMP TLSGGFELRP TNFFESNPVL KTLSPKLVGW PNCTSQH

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.