CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	22.37	50.0
KRH02147	Soybean	nucleus	78.07	26.41
KRH70957	Soybean	extracellular, plasma membrane	66.67	22.45
KRH75095	Soybean	nucleus	64.47	21.88
KRG91282	Soybean	extracellular	55.7	18.81
KRG91286	Soybean	nucleus	55.26	18.61
KRG91283	Soybean	extracellular	53.95	18.22
KRG91287	Soybean	extracellular, golgi, vacuole	41.67	14.35
KRH35530	Soybean	extracellular, plasma membrane	41.67	13.69
KRH13980	Soybean	extracellular, golgi, vacuole	42.98	13.39
KRH32975	Soybean	extracellular, golgi, vacuole	41.67	12.94
KRH74530	Soybean	cytosol	16.23	12.13
KRH45608	Soybean	mitochondrion	26.32	7.83
KRH69629	Soybean	peroxisome	25.88	7.76
KRG99420	Soybean	plastid	25.88	7.72
KRH54329	Soybean	plastid	25.0	7.36
KRH03234	Soybean	nucleus	25.0	4.36

Protein Annotations

Gene3D:2.70.98.20	MapMan:35.1	EMBL:ACUP02004721	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
EnsemblPlantsGene:GLYMA_07G255000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131
GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038
GO:GO:0055114	InterPro:IPR036460	UniProt:K7L3U0	EnsemblPlants:KRH50986	ProteinID:KRH50986	ProteinID:KRH50986.1
PFAM:PF01179	PANTHER:PTHR10638	PANTHER:PTHR10638:SF36	SUPFAM:SSF49998	UniParc:UPI0002958C09	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:43148306..43149820

Molecular Weight (calculated)

26428.4 Da

IEP (calculated)

10.034

GRAVY (calculated)

-0.514

Length

228 amino acids

Sequence
(BLAST)

001: MWRHTETGIP NESFAETRME VNLVLRTVVT VGNYDNWEFK TSASIKPSEI LLSRVYWKLR EWTLSTRVRS RAIDMEPWCQ QTALVFTTTT STFTISFEKT
101: SLKTVRVTDG SSKRKSYWTT EPNKKTSVGS QIRGAFTNFN VWVTPYNRTE DHGDDTLAVW TKKNRDINNK DIVLWHVVGI HHVPAQENFP IMPLLSTAFE
201: LRPTNFFERN PVLKTLSPKD VQWPGCPK

Best Arabidopsis Sequence Match ( AT1G31670.1 )
(BLAST)

001: MVNRDNSIVA LSFFMLFLLV LHLHFETTTA ARKPVRVFGP PSSIEWSPPS PPKDDFEWFE INIYKNIEQT AFRPTGQGPS QGIGHKDPPV FSSVFVIGSL
101: SFIPPPHPFD PLTEIELNLV RNIINERYPI GLEHRFTFQY VGLNEPDKSL VLSWVSSQYH NVKSPPRQAF VIARDHGKTR EIVVDFASQA IVSEKIHVGN
201: GYPMLTIDEQ QATSELVLKF KPFRDSIRRR GLNVSEVVVT TSTMGWFGEA KPERLIKKRP FYLNGSVNTY LRPIEGMTII VNLDQMKVTK FRDRFTSPLP
301: NAKGTEFRIS KLKPPFGPSL QNAVLFQSEG PGFKIDGHTN RWANWEFHMS FDVRAGLVIS LASIFDMDVN KYRQVLYKGH LSEIFVPYMD PSEDWYFRTF
401: FDCGEFGCGQ YAVSLEPYTD CPGNAAFMDG VFASQDGTPI KITNVMCIFE KYAGDIMWRH TEIEIPGLKV RPDVSLVVRM VTTVGNYDYI VDYEFKPSGS
501: IKIGVGLTGV LEVKPVKYVN TSEIKEDDIH GTIVADNTIG VNHDHFVTYR LDLDIDGTDN SFVRSELVTK RTPKSVNTPR KSYWTTKRLK AEELLVVNPS
601: RKTKHGNEVG YRLLHGPASE GPLLAQDDYP QIRAAFTNYN VWITPYNNTE VWASGLYADR SQGDDTLAVW SQRNRKIEKT DIVMWYTVGF HHVPCQEDFP
701: TMPTLFGGFE LRPTNFFEQN PDLKTKPIKL NTTPTCTARN D

Arabidopsis Description

SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.