CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P06650_001	Banana	peroxisome	76.61	84.96
Os04t0476100-01	Rice	peroxisome	56.2	83.98
GSMUA_Achr10P...	Banana	peroxisome	75.58	82.51
KRG99420	Soybean	plastid	80.49	81.54
KRH45608	Soybean	mitochondrion	80.62	81.46
KRH69629	Soybean	peroxisome	79.46	80.92
VIT_17s0000g09100.t01	Wine grape	peroxisome	82.17	80.4
Os02t0593100-00	Rice	cytosol	47.29	78.54
TraesCS6D01G191300.1	Wheat	peroxisome	76.23	78.35
TraesCS6B01G236300.4	Wheat	cytosol	65.89	78.34
HORVU6Hr1G053060.2	Barley	peroxisome	75.45	78.18
TraesCS6A01G207600.3	Wheat	peroxisome	75.58	77.69
PGSC0003DMT400059626	Potato	peroxisome	78.42	77.23
Os04t0136200-00	Rice	cytosol, peroxisome	61.11	77.16
Solyc08g014330.2.1	Tomato	peroxisome, plastid	78.42	77.03
Solyc06g071700.1.1	Tomato	plastid	77.0	77.0
TraesCS2A01G327600.1	Wheat	golgi	75.84	76.13
HORVU2Hr1G082420.6	Barley	cytosol	58.01	75.97
EES12364	Sorghum	peroxisome	76.74	75.96
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	76.36	75.77
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	75.84	75.74
TraesCS2B01G354400.1	Wheat	peroxisome	75.71	75.71
OQU89852	Sorghum	cytosol	61.89	75.31
PGSC0003DMT400069411	Potato	plastid	67.05	75.22
GSMUA_Achr6P12170_001	Banana	peroxisome	76.1	73.35
KRH74530	Soybean	cytosol	23.0	58.36
KRH03234	Soybean	nucleus	78.42	46.41
KRG91286	Soybean	nucleus	26.49	30.28
KRG91283	Soybean	extracellular	25.06	28.74
KRG91282	Soybean	extracellular	24.81	28.44
KRH32975	Soybean	extracellular, golgi, vacuole	26.49	27.93
KRH70957	Soybean	extracellular, plasma membrane	24.42	27.92
KRH75095	Soybean	nucleus	24.03	27.68
KRH13980	Soybean	extracellular, golgi, vacuole	25.97	27.46
KRH02147	Soybean	nucleus	23.51	27.0
KRG91287	Soybean	extracellular, golgi, vacuole	22.35	26.13
KRH35530	Soybean	extracellular, plasma membrane	22.61	25.22
KRH50986	Soybean	cytosol	7.36	25.0

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100798722	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	EMBL:ACUP02003514	InterPro:Cu_amine_oxidase
InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	EnsemblPlantsGene:GLYMA_06G178400
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152
GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	UniProt:I1KCC2
InterPro:IPR036460	EnsemblPlants:KRH54329	ProteinID:KRH54329	ProteinID:KRH54329.1	PFAM:PF01179	PFAM:PF02727
PFAM:PF02728	PANTHER:PTHR10638	PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416	UniParc:UPI000233AA62
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:15106383..15112823

Molecular Weight (calculated)

85754.3 Da

IEP (calculated)

6.812

GRAVY (calculated)

-0.265

Length

774 amino acids

Sequence
(BLAST)

001: MASVSQKTTS PSSSSCSATN AAAAIPRLAA APSPAPATAA AVPQDWTAAV TDVPRISSTN ASAAKGVVAA MPRAQSSHPL DPLSAAEISV AVATVRAAGS
101: TPELRDSMRF IEIVLLEPDK NVVALADAYF FPPFQPSLLP RARGGPLIPA KLPPRCARLV VYSRKTNETS IWIVELSQVH AVTRGGHHRG KVISSHVVPD
201: VQPPMDAEEY AECEAVVKSF PPFIEAMKKR GIEDMDLVMV DPWCVGYHSE ADAPGKRLAK PLIFCRSESD CPMENGYARP VEGIYVLVDM QNMVVLEFED
301: RKLVPLPPVD PLRNYTPGET RGGSDRSDVK PLQIIQPEGP SFRVNGYFVE WQKWNFRIGF TPKEGLVIYS VAYVDGSHGR RPVAHRLSFV EMVVPYGDPN
401: DPHYRKNAFD AGEDGLGKNA HSLKKGCDCL GYIKYFDAHF TNFTGGVETI ENCVCLHEED HGMLWKHQDW RTGLAEVRRS RRLTVSFICT VANYEYGFFW
501: HFYQDGRIEA EVKLTGILSL GALLPGEFRK YGTMIAPGLY APVHQHFFVA RMDMSVDSKP GEALNQVVEV NMKVEEPGEK NVHNNAFYAE ETLLRSELEA
601: MRDCNSLTAR HWVVRNTRTC NRTGQLTGYK LVPGSNCLPL AGSEAKFLRR AAFLKHNFWV TTYSRDELFP GGEFPNQNPR VGEGLATWVK QNRSLEETNV
701: VLWYIFGITH VPRLEDWPVM PVERIGFMLT PHGFFNCSPA VDVPPNACEM DSKDNDIKDN GSSKPIQSGL TAKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.