Factsheet for Solyc08g014330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

nucleus 1
plastid 2
peroxisome 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059626	Potato	peroxisome	96.83	97.07
Solyc06g071700.1.1	Tomato	plastid	84.39	85.92
Os04t0476100-01	Rice	peroxisome	55.46	84.36
GSMUA_Achr6P06650_001	Banana	peroxisome	74.49	84.1
GSMUA_Achr10P...	Banana	peroxisome	74.87	83.22
VIT_17s0000g09100.t01	Wine grape	peroxisome	80.33	80.03
TraesCS6B01G236300.4	Wheat	cytosol	65.48	79.26
Os02t0593100-00	Rice	cytosol	46.45	78.54
KRH54329	Soybean	plastid	77.03	78.42
TraesCS6D01G191300.1	Wheat	peroxisome	74.87	78.35
HORVU6Hr1G053060.2	Barley	peroxisome	73.6	77.64
TraesCS6A01G207600.3	Wheat	peroxisome	74.11	77.56
Solyc05g013440.2.1	Tomato	peroxisome, plastid	76.14	77.32
HORVU2Hr1G082420.6	Barley	cytosol	57.49	76.65
EES12364	Sorghum	peroxisome	76.02	76.6
Os04t0136200-00	Rice	cytosol, peroxisome	59.52	76.51
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	75.63	76.41
TraesCS2A01G327600.1	Wheat	golgi	74.24	75.88
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	74.49	75.74
TraesCS2B01G354400.1	Wheat	peroxisome	74.37	75.71
OQU89852	Sorghum	cytosol	60.53	75.0
GSMUA_Achr6P12170_001	Banana	peroxisome	73.73	72.35
KRH03234	Soybean	nucleus	72.46	43.65
Solyc09g090490.1.1	Tomato	vacuole	21.95	27.5
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	22.59	27.05
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	24.75	27.05
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	21.83	26.83
Solyc09g075940.2.1	Tomato	plasma membrane	21.45	26.37

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:K4CJ66	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	PANTHER:PTHR10638	PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416
EnsemblPlantsGene:Solyc08g014330.2	EnsemblPlants:Solyc08g014330.2.1	UniParc:UPI000276B294	SEG:seg	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:K4CJ66]

Coordinates

chr8:+:4154900..4162470

Molecular Weight (calculated)

88027.6 Da

IEP (calculated)

6.835

GRAVY (calculated)

-0.395

Length

788 amino acids

Sequence
(BLAST)

001: MATNSKKVTK SFTNSCPSTS LLLRRETTAA TAVVVDDGPQ KWTVIPSVDD NKQKKTSSSA IASLASNTEP LPSNTSTKGI QIMLRAQTCH PLDPLSAAEI
101: SVAVATVRAA GETPEVRDGM RFIEVVLLEP DKSVVALADA YFFPPFQSSL MPRTKGGSLI PTKLPPRRAR LIVYNKKTNE TSIWIVELTE VHAAARGGHH
201: RGKVISSNVV PDVQPPIDAQ EYAECEAVVK NYPPFREAMK RRDIDDMDLV MVDPWCVGYH SEADAPNRRL AKPLVFCRSE SDCPMENGYA RPVEGIHVLV
301: DVQNMQIIEF EDRKLVPLPP VDPLRNYTAG ETRGGVDRSD VKPLHIIQPE GPSFRISGNY VEWQKWNFRI GFTPREGLVI HSVAYLDGSR GRRPIAHRLS
401: FVEMVVPYGD PNDPHYRKNA FDAGEDGLGK NAHSLKRGCD CLGYIKYFDA HFTNFTGGVE TTENCVCLHE EDHGMLWKHQ DWRSGLAEVR RSRRLTVSFV
501: CTVANYEYAF YWHFYQDGKI EAEVKLTGIL SLGALQPGEY RKYGTTIAPG LYAPVHQHFF VARMNMAVDC KPGEAHNQVV EVNVKVEEPG KENVHNNAFY
601: AEETLLRSEL QAMRDCDPFS ARHWIVRNTR TVNRTGQLTG YKLVPGPNCL PLAGPEAKFM RRAAFLKHNL WVTQYAPGED FPGGEFPNQN PRAGEGLASW
701: VKQDRPLEES DTVLWYIFGI THVPRLEDWP VMPVEHIGFM LQPHGFFNCS PAVDVPPPSG CDSETRDSDV TESTSVAKHT TTGLMAKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.