Factsheet for Solyc03g005160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

plastid 1
peroxisome 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034947	Potato	cytosol	21.73	96.62
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	70.21	72.07
Solyc09g075940.2.1	Tomato	plasma membrane	69.15	70.98
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	60.79	61.82
KRG91287	Soybean	extracellular, golgi, vacuole	61.25	60.88
AT4G14940.1	Thale cress	extracellular, golgi	57.75	58.46
CDY50266	Canola	extracellular, golgi	56.84	57.54
KRH35530	Soybean	extracellular, plasma membrane	60.64	57.49
Bra036916.1-P	Field mustard	extracellular, golgi	56.69	57.47
CDY54865	Canola	extracellular, golgi	56.38	57.08
HORVU0Hr1G009050.1	Barley	cytosol	16.11	56.99
GSMUA_Achr8P15520_001	Banana	cytosol, peroxisome, plastid	22.04	56.2
Os07t0572100-01	Rice	cytosol	35.26	52.02
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	51.82	50.37
Os06t0338700-00	Rice	cytosol	40.58	48.9
Solyc09g090490.1.1	Tomato	vacuole	45.44	47.54
GSMUA_Achr9P11130_001	Banana	extracellular, vacuole	48.33	47.46
TraesCS4B01G282700.1	Wheat	extracellular	47.87	46.19
Os06t0338200-01	Rice	extracellular	48.48	45.7
TraesCS4D01G281700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	48.33	45.11
TraesCS4A01G020900.1	Wheat	plastid	47.57	45.04
Zm00001d006638_P001	Maize	mitochondrion	47.72	44.35
EES05551	Sorghum	extracellular	46.81	44.25
OQU88787	Sorghum	extracellular	47.87	44.24
EER97410	Sorghum	extracellular, vacuole	46.5	43.1
GSMUA_Achr8P15510_001	Banana	extracellular, golgi, vacuole	28.12	42.82
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	44.53	41.68
HORVU4Hr1G074620.2	Barley	extracellular	44.83	40.97
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	41.49	37.86
Os07t0572050-00	Rice	extracellular	12.46	30.26
Solyc05g013440.2.1	Tomato	peroxisome, plastid	27.36	23.2
Solyc08g014330.2.1	Tomato	peroxisome, plastid	27.05	22.59
Solyc06g071700.1.1	Tomato	plastid	26.44	22.48

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:K4BDU0	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF40
SUPFAM:SSF49998	SUPFAM:SSF54416	EnsemblPlantsGene:Solyc03g005160.2	EnsemblPlants:Solyc03g005160.2.1	TMHMM:TMhelix	UniParc:UPI0002768E84
SEG:seg	:	:	:	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:K4BDU0]

Coordinates

chr3:-:95840..98426

Molecular Weight (calculated)

75307.0 Da

IEP (calculated)

8.841

GRAVY (calculated)

-0.307

Length

658 amino acids

Sequence
(BLAST)

001: MKFSMEFIKV LALPIVIIVF LFCFTRSQCH HPLDPLSPSE INKIRVIIQK SHFSSLSNLT FHFVDLEEPK KEDVLHWMSL HKHKHKHVVS PYRRARVVVR
101: ANSETYEVVV DLSTRAIISE NVYTGHGYPP ITLDDIIQSS RLTLRNHQLQ DSILRRGLNI SEVSCIPQPA GWFGELKTRR VLNVPCFYRR GTTNFWARPI
201: EGITTLVDVE SMKIIKYIDR FRVPLPKAES AIFESSSQGS VTCNDSDTSR IIIKGNEVKW ANWDFHVGFN TRAGTIVSTA SIFDTTIKKY RRVLYRGHVS
301: ETFVPYMDPT FEWYYRTFMD IGEFGFGRSA SSLVPLLDCP SNAVYMVGYM ADSEGGVVQV PNAICIFERY VGDAAWRHTE NGVPGNTKSK GQQEVNLVVR
401: MVATVGNYDY TLDWEFKQSG AIKVGVSLTG VMETKAVKYT NDNQITEDAY GTLVAENTIA VNHDHFLTYY LDVDVDGTDN SFIKSKLITT TVKERKVSPR
501: KSYWKVVKET MKAESEAKTN LGQEPVELLI VNSNKKTKVG NDVSYRLIPS RPAMSLLSDD DYPQRRAAYM KYQLWVTPYN KSERWAGGFY TDRSHGDDGL
601: AIWSLRNRTI KNKDIVFWYT VGLHHVPCQE DFPVMPSIYE GFELRPTNFF QRNPLLKQ

Best Arabidopsis Sequence Match ( AT4G14940.1 )
(BLAST)

001: MNTSILAILF LIQCVFTLGL HFHPLDPLTP QEINKTSFIV KKSHLGNLKD LTFHYLDLEE PNKSHVLQWL SPNPSKKPPP PRRRSFVVVR AGGQTYELII
101: DLTTSKIASS RIYTGHGFPS FTFIELFKAS KLPLTYPPFK KSILDRSLNI SEVSCIPFTV GWYGETTTRR ELKASCFYRD GSVNVFTRPI EGITVTIDVD
201: SMQVIKYSDR FRKPIPDKEG NDFRTKHRPF PFFCNVSDTG FKILGNRVKW ANWKFHVGFT ARAGVTISTA SVLDPRTKRF RRVMYRGHVS ETFVPYMDPT
301: YEWYYRTFMD IGEFGFGRSA VNLQPLIDCP QNAAFLDGHV AGPDGTAQKM TNVMCVFEKN GYGASFRHTE INVPGQVITS GEAEISLVVR MVATLGNYDY
401: IVDWEFKKNG AIRVGVDLTG VLEVKATSYT SNDQITENVY GTLVAKNTIA VNHDHYLTYY LDLDVDGNGN SLVKAKLKTV RVTEVNKTSS RRKSYWTVVK
501: ETAKTEADGR VRLGSDPVEL LIVNPNKKTK IGNTVGYRLI PEHLQATSLL TDDDYPELRA GYTKYPVWVT AYDRSERWAG GFYSDRSRGD DGLAVWSSRN
601: REIENKDIVM WYNVGFHHIP YQEDFPVMPT LHGGFTLRPS NFFDNDPLIG

Arabidopsis Description

AO1Primary amine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23349]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.