Factsheet for TraesCS4B01G282700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G281700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	97.8	94.61
HORVU0Hr1G009050.1	Barley	cytosol	25.51	93.55
TraesCS4A01G020900.1	Wheat	plastid	95.31	93.53
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	88.56	85.92
HORVU4Hr1G074620.2	Barley	extracellular	90.03	85.28
Os07t0572050-00	Rice	extracellular	32.7	82.29
Os07t0572100-01	Rice	cytosol	52.05	79.6
Zm00001d006638_P001	Maize	mitochondrion	80.65	77.68
EER97410	Sorghum	extracellular, vacuole	79.91	76.76
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	60.85	61.3
PGSC0003DMT400034947	Potato	cytosol	13.2	60.81
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	48.68	51.31
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	46.77	49.38
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	46.33	49.3
Solyc09g075940.2.1	Tomato	plasma membrane	46.33	49.3
KRG91287	Soybean	extracellular, golgi, vacuole	47.65	49.09
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	46.04	48.91
AT4G14940.1	Thale cress	extracellular, golgi	46.33	48.62
Bra036916.1-P	Field mustard	extracellular, golgi	46.04	48.38
CDY50266	Canola	extracellular, golgi	46.04	48.31
CDY54865	Canola	extracellular, golgi	45.89	48.15
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	46.19	47.87
KRH35530	Soybean	extracellular, plasma membrane	47.8	46.97
TraesCS2B01G091300.1	Wheat	golgi	48.53	45.16
TraesCS2B01G354400.1	Wheat	peroxisome	28.45	25.06
TraesCS6B01G236300.4	Wheat	cytosol	23.31	24.42

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009308	GO:GO:0009719
GO:GO:0009753	GO:GO:0009867	GO:GO:0009987	GO:GO:0030312	GO:GO:0043067	GO:GO:0048038
GO:GO:0055114	GO:GO:0090059	InterPro:IPR036460	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728
ScanProsite:PS01164	PANTHER:PTHR10638	PANTHER:PTHR10638:SF59	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS4B01G282700	EnsemblPlants:TraesCS4B01G282700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:+:565987200..565993914

Molecular Weight (calculated)

74579.0 Da

IEP (calculated)

5.588

GRAVY (calculated)

-0.167

Length

682 amino acids

Sequence
(BLAST)

001: MLPLLLAAVS ILAAAAASAH HPHPLDPLSP AELTAVRAAV LASPLVPARP LTFHYVGLDE PDKPDVLSYV YGNSASSSRS AMPRRAFVIA RAGGQSHELR
101: VDVTDAAAPS VLGHAVHRGA GFPTLTLDEQ FAAVALPPAH PPFVESVRRR GVDMADVLCA VFPVGWFGDL PAEERRVVKL LCFVAGATAN FYARPLEGVT
201: LVVDLDRMAI VGYRDRVLLP VPKAEGTDYR AGNAGAPYAG RAPAPGTVVQ PEGRGFDIDG HFVRWANWEF HVGFDVRAGT VISLASIHDA EAGARRRVLY
301: RGFVSEVFVP YMDPAEEWYY RTFLDAGEYG LGLWAFPLQP GADCPANAAY LDGYYAGQDG KPVENKNMIC VFERYAGDVA WRHSEAGFPD RLITEVRPDV
401: SLVVRMVVSC GNYDYILDWE FKTSGSIKFT VSLTGLLEVK GTAYTHADQI MEDAHGTLVA ENTLAVYHDH YVTYHLDLDV DGTNNSFVKN TIATKRNEAG
501: TPRRSYWTVR REVAETEADA QVDVNAAPAD LLVVNPNKRT RMGNEVGYRV VPGGATAASV LDDDDYPQRR ASYCKKQVRV TPYSKAEKWA PGLYADQSTG
601: DDGLAAWSER DRGIRNEDIV LWYTVGIHHI PYQDDFPVMP TVSGGFELRP ANFFERNPLL TTRPPGLDQP PLVNCSCTGD SR

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.