Factsheet for PGSC0003DMT400034947

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15520_001	Banana	cytosol, peroxisome, plastid	66.22	37.98
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	96.62	21.73
Os07t0572100-01	Rice	cytosol	60.14	19.96
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	78.38	17.96
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	76.35	17.6
KRG91287	Soybean	extracellular, golgi, vacuole	71.62	16.01
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	69.59	15.92
Os06t0338700-00	Rice	cytosol	58.11	15.75
KRH35530	Soybean	extracellular, plasma membrane	71.62	15.27
Bra036916.1-P	Field mustard	extracellular, golgi	66.89	15.25
AT4G14940.1	Thale cress	extracellular, golgi	66.89	15.23
CDY50266	Canola	extracellular, golgi	66.89	15.23
CDY54865	Canola	extracellular, golgi	65.54	14.92
PGSC0003DMT400044197	Potato	extracellular, golgi	64.86	14.68
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	64.86	14.61
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	65.54	14.33
GSMUA_Achr9P11130_001	Banana	extracellular, vacuole	62.84	13.88
Os06t0338200-01	Rice	extracellular	64.86	13.75
OQU88787	Sorghum	extracellular	63.51	13.2
TraesCS4B01G282700.1	Wheat	extracellular	60.81	13.2
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	52.7	12.94
Zm00001d006638_P001	Maize	mitochondrion	61.49	12.85
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	60.81	12.8
EES05551	Sorghum	extracellular	60.14	12.79
HORVU4Hr1G074620.2	Barley	extracellular	62.16	12.78
TraesCS4D01G281700.1	Wheat	cytosol, extracellular, plasma membrane, plastid	60.81	12.77
TraesCS4A01G020900.1	Wheat	plastid	59.46	12.66
EER97410	Sorghum	extracellular, vacuole	60.14	12.54
PGSC0003DMT400049076	Potato	extracellular	56.08	11.51
PGSC0003DMT400069411	Potato	plastid	32.43	6.96
PGSC0003DMT400059626	Potato	peroxisome	32.43	6.11
Os07t0572050-00	Rice	extracellular	0.0	0.0
GSMUA_Achr8P15510_001	Banana	extracellular, golgi, vacuole	0.0	0.0
HORVU0Hr1G009050.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.70.98.20	MapMan:35.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152
GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460
UniProt:M1B1K3	PFAM:PF01179	EnsemblPlantsGene:PGSC0003DMG400013432	PGSC:PGSC0003DMG400013432	EnsemblPlants:PGSC0003DMT400034947	ScanProsite:PS01165
PANTHER:PTHR10638	PANTHER:PTHR10638:SF40	SUPFAM:SSF49998	UniParc:UPI0002965F53	:	:

Description

Primary amine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400013432]

Coordinates

chr3:-:271792..272631

Molecular Weight (calculated)

17166.4 Da

IEP (calculated)

9.271

GRAVY (calculated)

-0.624

Length

148 amino acids

Sequence
(BLAST)

001: MKTESEAKTN LGLEPVELLI VNSNKKTKVG NDVSYRLIPS RPAMSLLSDD DYPQRRAAYT KYQLWVTPYN KSERWAGGFY ADRSHGDDGL AIWSLRNRTI
101: KNKDIVLWYT VGLHHVPCQE DFPVMPSIYE GFELRPTNFF QRNPLLKQ

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.