Factsheet for PGSC0003DMT400059626

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g014330.2.1	Tomato	peroxisome, plastid	97.07	96.83
PGSC0003DMT400069411	Potato	plastid	75.19	85.65
Os04t0476100-01	Rice	peroxisome	55.98	84.94
GSMUA_Achr6P06650_001	Banana	peroxisome	74.68	84.1
GSMUA_Achr10P...	Banana	peroxisome	75.06	83.22
VIT_17s0000g09100.t01	Wine grape	peroxisome	80.53	80.03
TraesCS6B01G236300.4	Wheat	cytosol	65.27	78.8
KRH54329	Soybean	plastid	77.23	78.42
Os02t0593100-00	Rice	cytosol	46.31	78.11
TraesCS6D01G191300.1	Wheat	peroxisome	74.81	78.09
HORVU6Hr1G053060.2	Barley	peroxisome	73.54	77.38
TraesCS6A01G207600.3	Wheat	peroxisome	74.05	77.29
HORVU2Hr1G082420.6	Barley	cytosol	58.02	77.16
EES12364	Sorghum	peroxisome	76.46	76.85
Os04t0136200-00	Rice	cytosol, peroxisome	59.8	76.67
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	76.08	76.67
TraesCS2A01G327600.1	Wheat	golgi	74.94	76.39
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	75.06	76.13
TraesCS2B01G354400.1	Wheat	peroxisome	74.94	76.1
OQU89852	Sorghum	cytosol	60.94	75.31
GSMUA_Achr6P12170_001	Banana	peroxisome	73.41	71.86
KRH03234	Soybean	nucleus	72.52	43.58
PGSC0003DMT400034947	Potato	cytosol	6.11	32.43
PGSC0003DMT400044197	Potato	extracellular, golgi	23.92	28.75
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	23.92	28.61
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	21.12	27.53
PGSC0003DMT400049076	Potato	extracellular	24.68	26.91
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	22.01	26.78
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	21.63	26.48

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:M1C4I0	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	EnsemblPlantsGene:PGSC0003DMG400023173	PGSC:PGSC0003DMG400023173	EnsemblPlants:PGSC0003DMT400059626	PANTHER:PTHR10638
PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416	UniParc:UPI000295D08E	SEG:seg	:

Description

Methylputrescine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400023173]

Coordinates

chr8:+:7379099..7385153

Molecular Weight (calculated)

87607.0 Da

IEP (calculated)

6.699

GRAVY (calculated)

-0.405

Length

786 amino acids

Sequence
(BLAST)

001: MATTSKKVAK SFTDSCPSTS LLRREATAAT AVVVDDGPQK WTVIPSTDDN KQKQTPSAIA SLASNTEPLP SNTSTKGIQI MLKAQTCHPL DPLSAAEISV
101: AVATVRAAGE TPEVRDGMRF IEVVLLEPDK SVVALADAYF FPPFQSSLMP RNKGGSLIPT KLPPRRARLI VYNKKTNETS IWIVELTEVH AAARGGHHRG
201: KVISSNSVPD VQPPIDAQEY AECEAVVKNY PPFREAMKRR GIDDMDLVMV DPWCVGYHSE ADAPSRRLAK PLVFCRSESD CPMENGYARP VEGIHVLVDV
301: QNMEIIEFED RKLVPLPPVD PLRNYTAGET RGGVDRSDVK PLHIIQPEGP SFRISGNYVE WQKWNFRIGF TPREGLVIHS VAYLDGSRGR RPIAHRLSFV
401: EMVVPYGDPN DPHYRKNAFD AGEDGLGKNA HSLKRGCDCL GYIKYFDSHF TNFTGGVETT ENCVCLHEED HGMLWKHQDW RTGLSEVRRS RRLTVSFVCT
501: VANYEYAFYW HFYQDGKIEA EVKLTGILSL GALQPGESRK YGTTIAPGLY APVHQHFFVA RMNMAVDCKP GEAHNQVVEV NVKVEEPGKE NVHNNAFYAE
601: ETLLRSELQA MRDCDPFSAR HWIVRNTRTV NRTGQLTGYK LVPGPNCLPL AGPEAKFLRR AAFLKHNLWV TQYAPGEDFP GGEFPNQNPR AGEGLASWVK
701: QDRPLEESDT VLWYIFGITH VPRLEDWPVM PVEHIGFMLQ PHGFFNCSPA VDVPPPSGCD SESRDSEVTD NSSVAKHTTT GLMAKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.