Factsheet for HORVU2Hr1G082420.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G049860.2
HORVU2Hr1G082420.6
HORVU6Hr1G053060.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42490.1	HORVU2Hr1G082420.6	AT2G42490.1	21798944
AT2G42490.1	HORVU6Hr1G053060.2	AT2G42490.1	21798944
AT2G42490.1	HORVU1Hr1G049860.2	AT5G46570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0476100-01	Rice	peroxisome	78.68	89.77
TraesCS2A01G327600.1	Wheat	golgi	89.85	68.87
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	89.68	68.39
TraesCS2B01G354400.1	Wheat	peroxisome	89.51	68.35
GSMUA_Achr6P06650_001	Banana	peroxisome	79.19	67.05
GSMUA_Achr10P...	Banana	peroxisome	78.51	65.44
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	86.13	65.26
EES12364	Sorghum	peroxisome	86.29	65.22
HORVU6Hr1G053060.2	Barley	peroxisome	82.4	65.19
KRG99420	Soybean	plastid	78.0	60.34
KRH45608	Soybean	mitochondrion	78.17	60.31
AT2G42490.1	Thale cress	peroxisome	78.68	59.92
KRH69629	Soybean	peroxisome	76.82	59.74
VIT_00s0225g00090.t01	Wine grape	peroxisome	78.0	59.56
CDY47975	Canola	peroxisome	78.0	59.48
CDY14839	Canola	peroxisome, plastid	78.0	59.48
Solyc05g013440.2.1	Tomato	peroxisome, plastid	77.16	58.76
VIT_17s0000g09100.t01	Wine grape	peroxisome	78.34	58.53
GSMUA_Achr6P12170_001	Banana	peroxisome	79.19	58.28
PGSC0003DMT400059626	Potato	peroxisome	77.16	58.02
Solyc06g071700.1.1	Tomato	plastid	75.97	58.01
KRH54329	Soybean	plastid	75.97	58.01
Bra016871.1-P	Field mustard	plastid	77.16	57.94
Solyc08g014330.2.1	Tomato	peroxisome, plastid	76.65	57.49
PGSC0003DMT400069411	Potato	plastid	62.77	53.77
KRH74530	Soybean	cytosol	26.06	50.49
CDY35376	Canola	plastid	77.83	43.19
CDY22564	Canola	peroxisome, plastid	78.0	42.88
KRH03234	Soybean	nucleus	73.43	33.18
HORVU0Hr1G009050.1	Barley	cytosol	9.98	31.72
HORVU2Hr1G012710.4	Barley	extracellular	24.2	24.36
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	26.9	22.62
HORVU4Hr1G074620.2	Barley	extracellular	26.23	21.53

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	UniProt:A0A287IN77	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
EnsemblPlantsGene:HORVU2Hr1G082420	EnsemblPlants:HORVU2Hr1G082420.6	InterPro:IPR036460	PFAM:PF01179	PFAM:PF02728	PANTHER:PTHR10638
PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416	TMHMM:TMhelix	UniParc:UPI000B47DB70	SEG:seg

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:A0A287IN77]

Coordinates

chrchr2H:-:598004098..598007026

Molecular Weight (calculated)

65892.7 Da

IEP (calculated)

6.784

GRAVY (calculated)

-0.319

Length

591 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXHCDFLN SYILQDAMEY AECEATVKNY PPFVEAMKKR GVDDMELVMV DAWCAGYYSD ADAPSRRLAR PLIFCRTESD SPMENGYARP
101: VEGIHVVVDM QNNVVIEFED RKFVPLPPPD HLRNYTPGET RGGVDRSDVK PLIINQPEGP SFRINGYFVE WQKWNFRIGF TPKEGLVIYS VAYVDGSRGR
201: RPIAHRLSFV EMVVPYGDPS EPHYRKNAFD AGEDGLGKNA HSLKKGCDCL GYIKYFDAHF TNFTGHVETI ENCVCLHEED HGILWKHQDW RTGLAEVRRS
301: RRLTVSFICT VANYEYGFYW HFYQDGKIEA EVKLTGILSL GALMPGESRK YGTTIAPSLY APVHQHFFVA RMDMAVDCKP NEAHNQVVEV NVNVESAGTN
401: NVHNNAFYAE EKILKSELQA MRDCDPSSAR HWIVRNTRAV NRTGQPTGFR LVPGSNCLPF ALPEAKFLRR AGFLKHNLWV TPYKSDEKFP GGEFPNQNPR
501: LHEGLATWVK QDRPLEETDI VLWYVFGLTH IPRLEDWPVM PVERIGFMLM RGNRRVLSLL AISAEIMLVF SPAATWILQL LACCRCASWH L

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.