Factsheet for VIT_00s0225g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 4
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P06650_001	Banana	peroxisome	80.62	89.4
GSMUA_Achr10P...	Banana	peroxisome	80.62	88.01
Os04t0476100-01	Rice	peroxisome	57.49	85.91
VIT_17s0000g09100.t01	Wine grape	peroxisome	85.66	83.82
Os02t0593100-00	Rice	cytosol	48.97	81.33
TraesCS6B01G236300.4	Wheat	cytosol	68.35	81.26
TraesCS6D01G191300.1	Wheat	peroxisome	78.55	80.74
HORVU6Hr1G053060.2	Barley	peroxisome	77.52	80.32
TraesCS6A01G207600.3	Wheat	peroxisome	77.91	80.08
EES12364	Sorghum	peroxisome	80.1	79.28
TraesCS2A01G327600.1	Wheat	golgi	78.81	79.12
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	79.2	79.1
TraesCS2B01G354400.1	Wheat	peroxisome	79.07	79.07
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	79.46	78.85
Os04t0136200-00	Rice	cytosol, peroxisome	62.27	78.63
OQU89852	Sorghum	cytosol	64.6	78.62
HORVU2Hr1G082420.6	Barley	cytosol	59.56	78.0
GSMUA_Achr6P12170_001	Banana	peroxisome	79.97	77.09
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	5.17	39.22
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	25.71	29.84
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	25.45	29.23
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	24.94	28.55
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	26.49	28.2
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	23.39	27.98
VIT_05s0094g01210.t01	Wine grape	cytosol	11.5	27.55
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	13.82	26.23

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100249520	wikigene:100249520	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	EMBL:AM423437
ProteinID:CAN62304	ProteinID:CAN62304.1	ProteinID:CBI23365	ProteinID:CBI23365.3	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	UniProt:D7SYR4	EMBL:FN595256
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150
GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
InterPro:IPR036460	EntrezGene:LOC100249520	wikigene:LOC100249520	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728
PANTHER:PTHR10638	PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416	TIGR:TC61905	TIGR:TC67928
UniParc:UPI0001BE1E14	ArrayExpress:VIT_00s0225g00090	EnsemblPlantsGene:VIT_00s0225g00090	EnsemblPlants:VIT_00s0225g00090.t01	unigene:Vvi.3533	RefSeq:XP_002273532
RefSeq:XP_002273532.2	SEG:seg	:	:	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:D7SYR4]

Coordinates

chrUn:+:14636705..14650484

Molecular Weight (calculated)

86384.4 Da

IEP (calculated)

7.082

GRAVY (calculated)

-0.294

Length

774 amino acids

Sequence
(BLAST)

001: MAAATEKATT CCIEDAKPAP VRKASNVLQD WSVAGSAPSE DQISKRATVA TLIRSVDSLP QPAANPTATK GIPIMLRAQT SHPLDPLSAA EISVAVATVR
101: AAGATPEVRD SMRFVEVVLV EPEKHVVALA DAYFFPPFQP SLLPRTKGGP VIPSKLPPRQ ARLVVYNKRS NETSIWIVEL SEVHAATRGG HHRGKVISSK
201: VVADVQPPMD AVEYAECEAV VKDFPPFREA MKKRGIEDMD LVMVDPWCVG YHSDADAPSR RLAKPLIFCR TESDCPMENG YARPVEGIYV LVDMQNMVVV
301: EFEDRKLVPL PPADPLRNYT PGETRGGVDR SDVKPLQIIQ PEGPSFRVNG YFVEWQKWNF RIGFTPREGL VIYSVAYIDG SRGRRSVAHR LSFVEMVVPY
401: GDPNDPHYRK NAFDAGEDGL GKNAHSLKKG CDCLGYIKYF DAHFTNFTGG IETIENCVCL HEEDHGMLWK HQDWRTGLAE VRRSRRLTVS FVCTVANYEY
501: GFFWHFYQDG KIEAEVKLTG ILSLGALQPG EIRKYGTTIA PGLYAPVHQH FFVARMDMAV DCKPGETFNQ VVEVNVKVEE PGKNNVHNNA FYAEEKLLRS
601: EMQAMRDCNP LSARHWIIRN TRTVNRTGQL TGYKLVPGSN CLPLAGSEAK FLRRAAFLKH NLWVTPYARD EMYPGGEFPN QNPRVGEGLA TWVNQNRSLE
701: ETDIVLWYVF GVTHIPRLED WPVMPVEHIG FRLMPHGFFN CSPAVDVPPS TCELDLKDNG VTGKPIQNGL LAKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.