Factsheet for VIT_00s1682g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 3
cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
MultiLoc:	cytosol
Plant-mPloc:	nucleus, peroxisome
PProwler:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50986	Soybean	cytosol	50.0	22.37
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	82.35	11.55
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	61.76	9.45
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	61.76	9.35
KRH70957	Soybean	extracellular, plasma membrane	61.76	9.31
KRH75095	Soybean	nucleus	59.8	9.08
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	58.82	8.88
KRH02147	Soybean	nucleus	57.84	8.75
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	50.98	8.04
VIT_17s0000g09100.t01	Wine grape	peroxisome	41.18	5.31
VIT_00s0225g00090.t01	Wine grape	peroxisome	39.22	5.17
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_05s0094g01210.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.70.98.20	MapMan:35.1	ProteinID:CCB50225	ProteinID:CCB50225.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	UniProt:F6HDD0	EMBL:FN595658	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	PFAM:PF01179	ScanProsite:PS01165
PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	UniParc:UPI0002107F18	ArrayExpress:VIT_00s1682g00010	EnsemblPlantsGene:VIT_00s1682g00010
EnsemblPlants:VIT_00s1682g00010.t01	:	:	:	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F6HDD0]

Coordinates

chrUn:+:40147809..40148701

Molecular Weight (calculated)

11729.8 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.329

Length

102 amino acids

Sequence
(BLAST)

001: IWVTPYNRTE QWAGGLFVYQ SKGEDTLAVW SDRNRPIENR DIVLWYTLGF HHIPCQEDFP IMPTVSSSFD LKPVNFFESN PVLRAAPNFE KDLPVCRPAA
101: SS

Best Arabidopsis Sequence Match ( AT1G62810.1 )
(BLAST)

001: MAEPSFARLF LLFFSFLLIF ATYSWVFGPD SGFLFGTRVR KTLGSNRQVH VDHSLEKPHH PLDPLTVREI NRVRTILSNH DPGFGSGSAT IHSMALDEPE
101: KSRVVQWKKG NKLLSRRAAV VAYWGGQTHE ITVDLDSGRV VSDVINRTSG YPILTLNDVF AASQVPLKSL EFNRSIEARG VKFSDLACIT PFAGWFGSEE
201: EGRRVIRVQC FTLQGTTNYF MRPLEGLYVT VDLDKLEVIK IIDKGPIPIP KASGTEYRFG VQNKPVHMDR INPISMEQPD GPSFRVEDGH LVKWANWVFH
301: VKADQRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPEEGWYYK GYMDAGELGL GPTAMPLVPL NDCPRNSYYI DGVFASPDGK PIVQPNMICL
401: FERYAGDISW RHSEILFANA DIRESRPKVT LVARMATSVG NYDYIFDWEF QTDGLIRVTV AASGMLMVKG TPYDNVDDLG DREDDAGPLI SENVIGVVHD
501: HFITFHLDMD IDGPMNNSLV KVHLEKQRVP TGKSPRKSYL KVKKYIAKTE KDAQIKLSLY DPYEFHIVNP NRKSRVGNPA GYRIVPGGNA ASLLDHDDPP
601: QIRGAFTNNQ IWVTPYNRSE QYAGGVLIYQ SQGDDTLQVW SDRDRSIENK DIVLWYTLGF HHVPCQEDYP VMPTVAASFE LKPANFFESN PILGSAPFFE
701: KDLPVCRPFA SS

Arabidopsis Description

Primary amine oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1H9]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.