Factsheet for VIT_05s0020g03260.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
peroxisome 2
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular, peroxisome, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	88.76	87.83
Bra014912.1-P	Field mustard	cytosol	13.49	75.63
CDX77547	Canola	cytosol	13.49	75.63
CDY53725	Canola	cytosol	5.85	66.1
KRG91286	Soybean	nucleus	65.97	64.99
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	65.22	64.35
Bra038431.1-P	Field mustard	cytosol	35.83	63.56
CDY27138	Canola	cytosol	35.83	63.56
KRG91283	Soybean	extracellular	64.17	63.41
CDY27135	Canola	cytosol	51.42	63.4
Bra038432.1-P	Field mustard	cytosol	52.47	62.95
KRG91282	Soybean	extracellular	62.52	61.78
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	9.45	61.76
AT1G31690.1	Thale cress	extracellular	59.37	58.49
AT1G31710.1	Thale cress	extracellular, golgi	58.62	57.42
CDY53724	Canola	extracellular	10.49	56.91
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	53.97	55.64
CDY56663	Canola	extracellular, golgi, vacuole	49.92	53.19
AT1G31670.1	Thale cress	extracellular, plasma membrane	58.17	52.36
VIT_05s0094g01210.t01	Wine grape	cytosol	22.79	47.06
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	47.68	43.74
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	22.94	37.5
VIT_17s0000g09100.t01	Wine grape	peroxisome	31.18	26.3
VIT_00s0225g00090.t01	Wine grape	peroxisome	29.84	25.71

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100259696	wikigene:100259696	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EMBL:AM454377
ProteinID:CAN76699	ProteinID:CAN76699.1	ProteinID:CBI26233	ProteinID:CBI26233.3	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	UniProt:D7T6W2	EMBL:FN595749
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150
GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
InterPro:IPR036460	EntrezGene:LOC100259696	wikigene:LOC100259696	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728
ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF36	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM
UniParc:UPI00015C76B6	ArrayExpress:VIT_05s0020g03260	EnsemblPlantsGene:VIT_05s0020g03260	EnsemblPlants:VIT_05s0020g03260.t01	RefSeq:XP_002278182	RefSeq:XP_002278182.1
SEG:seg	:	:	:	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:D7T6W2]

Coordinates

chr5:+:5040289..5043665

Molecular Weight (calculated)

75120.1 Da

IEP (calculated)

5.192

GRAVY (calculated)

-0.277

Length

667 amino acids

Sequence
(BLAST)

001: MASLLQHLGL FLLFFVSCHS QYHPLDSLTP SEFHQVQAIV KGSNPGSSLN MTFQYVGLDE PDKSIVLSWL SNPNSTTPPP PRRAFVITRL HSQTHEIIVD
101: LSTQSIISDE VYGGHGYPLL TSEEQTAASV LPLTYPPFIA SITKRSLKLS DVVCSTFTVG WFGEDKSRRV LKIPCFYTDG TANLYMRPIE GVTIVVDLDD
201: MKIIEYYDRL MVPVPEAEGT ECRLSKQNPP FGPPLNGVSA MPPDGPGFKI DGHNVRWANW DFHISFDARA GLIISLASIY DLQKGTFRQV LYRGHVSELF
301: VPYMDPTEEW YYRTYFDEGE FGLGICTVPL QPMLDCPPNA VFTDGYYASQ DGKPMSISNA FCVYEQEAGR IMWRHTETDI PGEEIKEVRP EVSLVVRMVV
401: ALTNYDYILD WEFKPSGSIK FGVGLTGIPA VKGVSYTHTD QIKEDVYGTL LAPNAIGVNH DHFFTYRLDL DVDGDANSFV KANLETKRVT DNSSPRKSYW
501: TVVSETAKTE SDAQIQLRLK PVEQIVVNPN KKTKLGNYVG YRLIPGSLSS PLLSDDDYPQ IRGAFTKYDV WITPYNKSEK WAGGLYMDQS RGDDTLAVWS
601: QRNREIENKD IVLWYTIGFH HVPCQEDFPV MPTLSGGFEL RPTNFFENNP VLKTKPPTPV SWPNCTH

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.