CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
MultiLoc:	cytosol
Plant-mPloc:	extracellular, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038431.1-P	Field mustard	cytosol	100.0	100.0
CDY53725	Canola	cytosol	14.63	93.22
CDX77547	Canola	cytosol	26.86	84.87
CDY27135	Canola	cytosol	78.72	54.71
CDY53724	Canola	extracellular	16.22	49.59
CDY04405	Canola	cytosol	32.98	48.82
AT1G31690.1	Thale cress	extracellular	85.37	47.42
CDY69801	Canola	cytosol	18.62	44.03
CDY56663	Canola	extracellular, golgi, vacuole	72.07	43.29
AT1G31670.1	Thale cress	extracellular, plasma membrane	80.05	40.62
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	66.76	37.24
KRG91286	Soybean	nucleus	64.89	36.04
KRG91282	Soybean	extracellular	64.63	36.0
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	63.56	35.83
KRG91283	Soybean	extracellular	63.3	35.26
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	60.37	33.58
PGSC0003DMT400044197	Potato	extracellular, golgi	58.24	33.49
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	58.24	33.33
CDY50266	Canola	extracellular, golgi	55.85	32.31
CDY54865	Canola	extracellular, golgi	55.85	32.31
CDY25701	Canola	cytosol	48.4	32.16
Solyc09g090490.1.1	Tomato	vacuole	50.8	30.37
CDX97353	Canola	cytosol	30.32	27.94
CDX97351	Canola	extracellular, plasma membrane	52.66	26.65
CDY04409	Canola	extracellular, plasma membrane	52.39	26.51
CDY32205	Canola	extracellular, vacuole	40.43	23.53
CDY47975	Canola	peroxisome	29.26	14.19
CDY14839	Canola	peroxisome, plastid	29.26	14.19
CDY35376	Canola	plastid	29.26	10.33
CDY22564	Canola	peroxisome, plastid	29.26	10.23

Protein Annotations

Gene3D:2.70.98.20	MapMan:8.5.1	GO:A0A078GR74	UniProt:A0A078GR74	EnsemblPlants:CDY27138	ProteinID:CDY27138
ProteinID:CDY27138.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00036981001	InterPro:IPR036460
PFAM:PF01179	ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF36	SUPFAM:SSF49998
UniParc:UPI000254675C	SEG:seg	:	:	:	:

Description

BnaA08g07760DAmine oxidase [Source:UniProtKB/TrEMBL;Acc:A0A078GR74]

Coordinates

chrLK032200:-:230809..236363

Molecular Weight (calculated)

42580.4 Da

IEP (calculated)

6.407

GRAVY (calculated)

-0.430

Length

376 amino acids

Sequence
(BLAST)

001: MFVPYMDPVS DDWYSITYLD CGDFGCGQSA VSLEPYTDCP TNAAFMDGIF ASQDGTPTKV SNVMCIFEKY AGNIMWRHTE AEIPWLKITE VRPDVSLVVR
101: MVTTVGNYDY IVDYEFKPSG SIKVGVGLTG VLEDKPVEYV HTSEIKEDDI YGTIVADNTV AVNHDHFVTF RLDLDVDGKD NSFVRTKLVT KRTQKSVGTP
201: RKSYWTTNRK VAKTEAEARV KLGLRAEELM VVNPNRRTKH GNEVGYRLLP GTVSGPLLTQ DDYPQIRAAF TNYNVWITPY NKSEVWASGL YADRSQGDDT
301: LAVWSQRNRK RENKDIVMWY TVGFHHVPCQ EDFPTTPTLS SGFELRPVNF FEQNPVLKTK LIKLTTTPKC TPSKNN

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.