CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77547	Canola	cytosol	84.75	42.02
Bra038431.1-P	Field mustard	cytosol	93.22	14.63
CDY27138	Canola	cytosol	93.22	14.63
CDY56663	Canola	extracellular, golgi, vacuole	84.75	7.99
CDY27135	Canola	cytosol	71.19	7.76
CDX97353	Canola	cytosol	50.85	7.35
AT1G31690.1	Thale cress	extracellular	74.58	6.5
AT1G31670.1	Thale cress	extracellular, plasma membrane	76.27	6.07
KRG91286	Soybean	nucleus	67.8	5.91
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	66.1	5.85
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	66.1	5.79
KRG91283	Soybean	extracellular	64.41	5.63
KRG91282	Soybean	extracellular	61.02	5.33
CDY25701	Canola	cytosol	50.85	5.3
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	59.32	5.18
CDY32205	Canola	extracellular, vacuole	50.85	4.64
Solyc09g090490.1.1	Tomato	vacuole	49.15	4.61
PGSC0003DMT400044197	Potato	extracellular, golgi	49.15	4.43
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	49.15	4.41
CDY04409	Canola	extracellular, plasma membrane	52.54	4.17
CDX97351	Canola	extracellular, plasma membrane	52.54	4.17
CDY50266	Canola	extracellular, golgi	45.76	4.15
CDY54865	Canola	extracellular, golgi	45.76	4.15
CDY47975	Canola	peroxisome	32.2	2.45
CDY14839	Canola	peroxisome, plastid	32.2	2.45
CDY35376	Canola	plastid	32.2	1.78
CDY22564	Canola	peroxisome, plastid	32.2	1.77
CDY53724	Canola	extracellular	3.39	1.63
CDY69801	Canola	cytosol	0.0	0.0
CDY04405	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.70.98.20	MapMan:35.1	GO:A0A078IRN9	UniProt:A0A078IRN9	EnsemblPlants:CDY53725	ProteinID:CDY53725
ProteinID:CDY53725.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00011296001	InterPro:IPR036460
PFAM:PF01179	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF36	SUPFAM:SSF49998	UniParc:UPI0004EC6B45

Description

BnaC08g47510DAmine oxidase [Source:UniProtKB/TrEMBL;Acc:A0A078IRN9]

Coordinates

chrLK033231:+:44362..44541

Molecular Weight (calculated)

6818.3 Da

IEP (calculated)

8.511

GRAVY (calculated)

-0.334

Length

59 amino acids

Sequence
(BLAST)

1: MWYTVGFHHV PCQEDFPTMP TLSSGFELRP VNFFEQNPVF KTKLIKLTTA PKCTPCKNN

Best Arabidopsis Sequence Match ( AT1G31710.1 )
(BLAST)

001: MAPLHFTILI LFSFVIVVSS SSFTPPRHPF DPLTETELKL VRTIINKSYP VGPNHKFTFQ YVGLNEPNKS LVLSWYSSPN HTIKPPPRQA FVIARDNGKT
101: REIVLDFSSR AIVSDKIHVG NGYPMLSNDE QEASTELVVK FKPFIDSVAK RGLNVSEIVF TTSTIGWYGE TKAEAERVIR LMPFYLDGTV NMYLRPIEGM
201: TIIVNLDEMK VSEFKDRSVV TMPIANGTEY RISKLNPPFG PTLHNAVLLQ PDGPGFKVDG HIVRWANWEF HISFDVRAGI VISLASLFDT DVNKYRQVLY
301: KGHLSEMFIP YMDPSDDWYF ITYLDCGDFG CGQCAVSLQP YTDCPAGAVF MDGIFAGQDG TPAKIPKVMC IFEKYAGDIM WRHTEAEIPN LEITEVRPDV
401: SLVARIVTTV GNYDYIVDYE FKPSGSIKMG VGLTGVLEVK PVEYIHTSEI KLGEDIHGTI VADNTVGVNH DHFVTFRLHL DIDGTENSFV RNELVTTRSP
501: KSVNTPRKTY WTTKPKTAKT EAEARVKLGL KAEELVVVNP NRKTKHGNEV GYRLLHGSAA GPLLAQDDFP QIRAAFTNYN VWITPYNRSE VWAGGLYADR
601: SQGDDTLAVW SQRNRKIEKE DIVMWYTVGF HHVPSQEDYP TMPTLSGGFE LRPTNFFERN PVLKTKPVKV TTARKCTPKN D

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX1]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.