CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 2
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27135	Canola	cytosol	73.17	16.64
Bra038431.1-P	Field mustard	cytosol	49.59	16.22
CDY27138	Canola	cytosol	49.59	16.22
AT1G31690.1	Thale cress	extracellular	76.42	13.88
AT1G31670.1	Thale cress	extracellular, plasma membrane	74.8	12.42
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	57.72	10.53
KRG91282	Soybean	extracellular	57.72	10.52
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	56.91	10.49
KRG91283	Soybean	extracellular	55.28	10.07
CDY25701	Canola	cytosol	46.34	10.07
KRG91286	Soybean	nucleus	55.28	10.04
CDY54865	Canola	extracellular, golgi	49.59	9.38
CDY50266	Canola	extracellular, golgi	49.59	9.38
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	49.59	9.02
PGSC0003DMT400044197	Potato	extracellular, golgi	47.97	9.02
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	47.97	8.98
CDY04409	Canola	extracellular, plasma membrane	47.97	7.94
CDX97351	Canola	extracellular, plasma membrane	47.97	7.94
Solyc09g090490.1.1	Tomato	vacuole	39.84	7.79
CDX97353	Canola	cytosol	25.2	7.6
CDY32205	Canola	extracellular, vacuole	37.4	7.12
CDY69801	Canola	cytosol	8.13	6.29
CDY47975	Canola	peroxisome	29.27	4.65
CDY14839	Canola	peroxisome, plastid	29.27	4.65
CDY56663	Canola	extracellular, golgi, vacuole	23.58	4.63
CDY04405	Canola	cytosol	8.13	3.94
CDY53725	Canola	cytosol	1.63	3.39
CDY35376	Canola	plastid	29.27	3.38
CDY22564	Canola	peroxisome, plastid	29.27	3.35
CDX77547	Canola	cytosol	1.63	1.68

Protein Annotations

Gene3D:2.70.98.20	MapMan:35.1	GO:A0A078IWG1	UniProt:A0A078IWG1	EnsemblPlants:CDY53724	ProteinID:CDY53724
ProteinID:CDY53724.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00011295001	InterPro:IPR036460
PFAM:PF01179	PANTHER:PTHR10638	PANTHER:PTHR10638:SF36	SUPFAM:SSF49998	UniParc:UPI0004EEE6AB	:

Description

BnaC08g47500DAmine oxidase [Source:UniProtKB/TrEMBL;Acc:A0A078IWG1]

Coordinates

chrLK033231:+:33288..33878

Molecular Weight (calculated)

14023.9 Da

IEP (calculated)

4.226

GRAVY (calculated)

0.238

Length

123 amino acids

Sequence
(BLAST)

001: MVVNGWANWG FHMSFDVRAG LVISLASIFD MDVNKYRQVL YKGRLSEMFV PYMVPVSDDW YSITYLDCGD FGCGQSTVSL EPYNDCPAND AFMDGITEAR
101: PDVSLVVRMV TTFLKIFQFN FLI

Best Arabidopsis Sequence Match ( AT1G31670.1 )
(BLAST)

001: MVNRDNSIVA LSFFMLFLLV LHLHFETTTA ARKPVRVFGP PSSIEWSPPS PPKDDFEWFE INIYKNIEQT AFRPTGQGPS QGIGHKDPPV FSSVFVIGSL
101: SFIPPPHPFD PLTEIELNLV RNIINERYPI GLEHRFTFQY VGLNEPDKSL VLSWVSSQYH NVKSPPRQAF VIARDHGKTR EIVVDFASQA IVSEKIHVGN
201: GYPMLTIDEQ QATSELVLKF KPFRDSIRRR GLNVSEVVVT TSTMGWFGEA KPERLIKKRP FYLNGSVNTY LRPIEGMTII VNLDQMKVTK FRDRFTSPLP
301: NAKGTEFRIS KLKPPFGPSL QNAVLFQSEG PGFKIDGHTN RWANWEFHMS FDVRAGLVIS LASIFDMDVN KYRQVLYKGH LSEIFVPYMD PSEDWYFRTF
401: FDCGEFGCGQ YAVSLEPYTD CPGNAAFMDG VFASQDGTPI KITNVMCIFE KYAGDIMWRH TEIEIPGLKV RPDVSLVVRM VTTVGNYDYI VDYEFKPSGS
501: IKIGVGLTGV LEVKPVKYVN TSEIKEDDIH GTIVADNTIG VNHDHFVTYR LDLDIDGTDN SFVRSELVTK RTPKSVNTPR KSYWTTKRLK AEELLVVNPS
601: RKTKHGNEVG YRLLHGPASE GPLLAQDDYP QIRAAFTNYN VWITPYNNTE VWASGLYADR SQGDDTLAVW SQRNRKIEKT DIVMWYTVGF HHVPCQEDFP
701: TMPTLFGGFE LRPTNFFEQN PDLKTKPIKL NTTPTCTARN D

Arabidopsis Description

SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.