Factsheet for PGSC0003DMT400044197

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	97.4	96.96
Solyc09g090490.1.1	Tomato	vacuole	88.99	92.53
PGSC0003DMT400034947	Potato	cytosol	14.68	64.86
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	63.61	61.54
Bra014912.1-P	Field mustard	cytosol	11.16	61.34
CDX77547	Canola	cytosol	11.16	61.34
Bra038431.1-P	Field mustard	cytosol	33.49	58.24
CDY27138	Canola	cytosol	33.49	58.24
KRG91283	Soybean	extracellular	59.02	57.19
Bra038432.1-P	Field mustard	cytosol	48.17	56.65
CDY27135	Canola	cytosol	46.79	56.56
KRG91286	Soybean	nucleus	58.41	56.43
AT1G31690.1	Thale cress	extracellular	55.5	53.62
KRG91282	Soybean	extracellular	55.2	53.48
AT1G31710.1	Thale cress	extracellular, golgi	54.59	52.42
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	50.76	51.39
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	49.54	50.47
CDY53725	Canola	cytosol	4.43	49.15
CDY53724	Canola	extracellular	9.02	47.97
CDY56663	Canola	extracellular, golgi, vacuole	45.57	47.6
AT1G31670.1	Thale cress	extracellular, plasma membrane	53.36	47.1
PGSC0003DMT400049076	Potato	extracellular	47.25	42.86
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	39.45	42.79
PGSC0003DMT400069411	Potato	plastid	25.84	24.49
PGSC0003DMT400059626	Potato	peroxisome	28.75	23.92

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:M1BFS3	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	EnsemblPlantsGene:PGSC0003DMG400017157	PGSC:PGSC0003DMG400017157	EnsemblPlants:PGSC0003DMT400044197	ScanProsite:PS01164
ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF58	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM
UniParc:UPI00029671E9	SEG:seg	:	:	:	:

Description

Primary amine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400017157]

Coordinates

chr9:-:56835600..56838206

Molecular Weight (calculated)

74573.1 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.268

Length

654 amino acids

Sequence
(BLAST)

001: MPLFFKISLF FFFVSSSYPL DNNHPLESLT LFELTQVTNI VKNSYFPLNV TFHYVGLNEP NKQLVLSWLS STHHPALPRE AIVITRIDQK THEIIVDLSS
101: VSILSDKIYN GHGYPMLTLQ EQTAADELPL SYPPFISSIK KRRLKLKEVA CQGYPVGWYG EKKKSTNRMV KVICYYLDGT INLYMRPIEG ITIIVLLDQM
201: TIASYIDRLI VPVPKANGTD YMGSKRRRSS HESNSIKIVQ PDGPSFTLDN GNTVRWGDWK FHVAYDMRAG IIISLASMFD ADKREFRSVM YRGFVSEVFV
301: PYIDLTEEWY YRTYFDAGEY GFGLCAVELE ASKDCPENAK FIDGYFISQD GTPGKMPNVI CIFERYAGDI MWRHTELAIP GKVIRKVRPE VSLVVRMVST
401: VGNYDYITDY EFKQSGTIKV TVGLTGLLEV RGSIYTHNDQ IKEEVYGTLI AENTLGAYHD HFFTYHLDLD IDGHENSFVK NNLKTRRVVN KSSPRKSYWA
501: VVSETAETES DARIQLGSSR GALEMVVVNP NKKTEVGNEI GYCLIPGGSA TNPLLSDDDY PQIRGGFTKY NVWVTPYNKS EKWAGGLYTD QSHGDDTLAM
601: WSLRDREIKN KDIVLWYTFG VHHVPKQEDF PIMPTLSTGF ELKPTNFFQH NPVL

Best Arabidopsis Sequence Match ( AT1G31710.1 )
(BLAST)

001: MAPLHFTILI LFSFVIVVSS SSFTPPRHPF DPLTETELKL VRTIINKSYP VGPNHKFTFQ YVGLNEPNKS LVLSWYSSPN HTIKPPPRQA FVIARDNGKT
101: REIVLDFSSR AIVSDKIHVG NGYPMLSNDE QEASTELVVK FKPFIDSVAK RGLNVSEIVF TTSTIGWYGE TKAEAERVIR LMPFYLDGTV NMYLRPIEGM
201: TIIVNLDEMK VSEFKDRSVV TMPIANGTEY RISKLNPPFG PTLHNAVLLQ PDGPGFKVDG HIVRWANWEF HISFDVRAGI VISLASLFDT DVNKYRQVLY
301: KGHLSEMFIP YMDPSDDWYF ITYLDCGDFG CGQCAVSLQP YTDCPAGAVF MDGIFAGQDG TPAKIPKVMC IFEKYAGDIM WRHTEAEIPN LEITEVRPDV
401: SLVARIVTTV GNYDYIVDYE FKPSGSIKMG VGLTGVLEVK PVEYIHTSEI KLGEDIHGTI VADNTVGVNH DHFVTFRLHL DIDGTENSFV RNELVTTRSP
501: KSVNTPRKTY WTTKPKTAKT EAEARVKLGL KAEELVVVNP NRKTKHGNEV GYRLLHGSAA GPLLAQDDFP QIRAAFTNYN VWITPYNRSE VWAGGLYADR
601: SQGDDTLAVW SQRNRKIEKE DIVMWYTVGF HHVPSQEDYP TMPTLSGGFE LRPTNFFERN PVLKTKPVKV TTARKCTPKN D

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX1]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.