Factsheet for PGSC0003DMT400044305

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044197	Potato	extracellular, golgi	96.96	97.4
Solyc09g090490.1.1	Tomato	vacuole	87.37	91.26
PGSC0003DMT400034947	Potato	cytosol	14.61	64.86
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	63.93	62.13
Bra014912.1-P	Field mustard	cytosol	11.11	61.34
CDX77547	Canola	cytosol	11.11	61.34
Bra038431.1-P	Field mustard	cytosol	33.33	58.24
CDY27138	Canola	cytosol	33.33	58.24
KRG91283	Soybean	extracellular	59.06	57.48
CDY27135	Canola	cytosol	46.42	56.38
KRG91286	Soybean	nucleus	57.99	56.28
Bra038432.1-P	Field mustard	cytosol	47.49	56.12
KRG91282	Soybean	extracellular	54.95	53.48
AT1G31690.1	Thale cress	extracellular	54.95	53.32
AT1G31710.1	Thale cress	extracellular, golgi	54.03	52.13
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	50.68	51.55
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	49.32	50.47
CDY53725	Canola	cytosol	4.41	49.15
CDY53724	Canola	extracellular	8.98	47.97
CDY56663	Canola	extracellular, golgi, vacuole	45.36	47.6
AT1G31670.1	Thale cress	extracellular, plasma membrane	52.82	46.83
PGSC0003DMT400049076	Potato	extracellular	46.42	42.3
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	38.66	42.12
PGSC0003DMT400069411	Potato	plastid	25.42	24.2
PGSC0003DMT400059626	Potato	peroxisome	28.61	23.92

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:102605322	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:M1BFZ2
PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	EnsemblPlantsGene:PGSC0003DMG400017203	PGSC:PGSC0003DMG400017203	EnsemblPlants:PGSC0003DMT400044305
ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF58	SUPFAM:SSF49998	SUPFAM:SSF54416
SignalP:SignalP-noTM	UniParc:UPI0002956E2D	RefSeq:XP_006354449.1	SEG:seg	:	:

Description

Primary amine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400017203]

Coordinates

chr9:+:56832243..56834873

Molecular Weight (calculated)

75036.6 Da

IEP (calculated)

6.426

GRAVY (calculated)

-0.236

Length

657 amino acids

Sequence
(BLAST)

001: MPLFFKISLF FFYFFFVISS SPLEYNHPLE SLALFELTQV TNIVKNSYFP LNVTFHYVGL NEPNKQLVLS WLSSTHHPAL PREAIVITRI DQKTHEIIVD
101: LSSVSILSDK IYNGHGYPML TLQEQTAADE LPLSYPPFIS SIKKRRLKLK EVVCQGFAVG WYGEKRKSTN RMVKVMCYYL DGTVNLYMRP IEGITITVLL
201: DQMTIASYID RLIVPVPKAN GTDYMGSKRR RSSHESNSIK IVQPDGPSFT LDNGNTVWWG DWKFHVAYDM RAGMIISLAS IFDAEKEEFR SVMYRGFVSE
301: VFVPYIDLTE EWYYRTYFDA GEYGFGLCAV ELEASKDCPE NAKFIDGYFI SQDGTPGKMP NVICIFERYA GDIMWRHTEL AIPGKVIRKV RPEVSLVVRM
401: VSTVGNYDYI TDYEFKQSGT IKVTVGLTGL LEVRGSIYTH NDQIKEEVYG TLIAENTLGA YHDHFFTYHL DLDIDGHENS FVKNNLKTRR VVNKSSPRKS
501: YWAVVSETAE TESDARIQLG SSRGALEMVV VNPNKKTEVG NEIGYCLIPG GSATNPLLSD DDYPQIRGGF TKYNVWVTPY NKSEKWAGGL YTDQSHGDDT
601: LAMWSLRDRE IKNKDIVLWY TFGVHHVPKQ EDFPIMPTLS TGFELKPTNF FQHNPVL

Best Arabidopsis Sequence Match ( AT1G31710.1 )
(BLAST)

001: MAPLHFTILI LFSFVIVVSS SSFTPPRHPF DPLTETELKL VRTIINKSYP VGPNHKFTFQ YVGLNEPNKS LVLSWYSSPN HTIKPPPRQA FVIARDNGKT
101: REIVLDFSSR AIVSDKIHVG NGYPMLSNDE QEASTELVVK FKPFIDSVAK RGLNVSEIVF TTSTIGWYGE TKAEAERVIR LMPFYLDGTV NMYLRPIEGM
201: TIIVNLDEMK VSEFKDRSVV TMPIANGTEY RISKLNPPFG PTLHNAVLLQ PDGPGFKVDG HIVRWANWEF HISFDVRAGI VISLASLFDT DVNKYRQVLY
301: KGHLSEMFIP YMDPSDDWYF ITYLDCGDFG CGQCAVSLQP YTDCPAGAVF MDGIFAGQDG TPAKIPKVMC IFEKYAGDIM WRHTEAEIPN LEITEVRPDV
401: SLVARIVTTV GNYDYIVDYE FKPSGSIKMG VGLTGVLEVK PVEYIHTSEI KLGEDIHGTI VADNTVGVNH DHFVTFRLHL DIDGTENSFV RNELVTTRSP
501: KSVNTPRKTY WTTKPKTAKT EAEARVKLGL KAEELVVVNP NRKTKHGNEV GYRLLHGSAA GPLLAQDDFP QIRAAFTNYN VWITPYNRSE VWAGGLYADR
601: SQGDDTLAVW SQRNRKIEKE DIVMWYTVGF HHVPSQEDYP TMPTLSGGFE LRPTNFFERN PVLKTKPVKV TTARKCTPKN D

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX1]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.