Factsheet for VIT_05s0020g03320.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	68.05	68.25
Bra014912.1-P	Field mustard	cytosol	11.69	66.39
CDX77547	Canola	cytosol	11.69	66.39
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	64.35	65.22
PGSC0003DMT400044305	Potato	extracellular, golgi, vacuole	62.13	63.93
PGSC0003DMT400044197	Potato	extracellular, golgi	61.54	63.61
Solyc09g090490.1.1	Tomato	vacuole	57.84	62.16
KRG91283	Soybean	extracellular	61.09	61.19
Bra038431.1-P	Field mustard	cytosol	33.58	60.37
CDY27138	Canola	cytosol	33.58	60.37
KRG91282	Soybean	extracellular	59.62	59.7
KRG91286	Soybean	nucleus	59.62	59.53
CDY53725	Canola	cytosol	5.18	59.32
CDY27135	Canola	cytosol	47.19	58.96
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	8.88	58.82
Bra038432.1-P	Field mustard	cytosol	48.08	58.45
AT1G31690.1	Thale cress	extracellular	55.92	55.83
AT1G31710.1	Thale cress	extracellular, golgi	55.03	54.63
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	50.59	52.86
CDY56663	Canola	extracellular, golgi, vacuole	47.34	51.12
CDY53724	Canola	extracellular	9.02	49.59
AT1G31670.1	Thale cress	extracellular, plasma membrane	53.85	49.12
VIT_05s0094g01210.t01	Wine grape	cytosol	22.49	47.06
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	47.78	44.43
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	21.89	36.27
VIT_17s0000g09100.t01	Wine grape	peroxisome	29.88	25.54
VIT_00s0225g00090.t01	Wine grape	peroxisome	28.55	24.94

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100251211	wikigene:100251211	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EMBL:AM468012
ProteinID:CAN68223	ProteinID:CAN68223.1	ProteinID:CBI26239	ProteinID:CBI26239.3	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	UniProt:D7T6W8	EMBL:FN595749
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150
GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
InterPro:IPR036460	EntrezGene:LOC100251211	wikigene:LOC100251211	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728
ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF58	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00015C76BC	ArrayExpress:VIT_05s0020g03320	EnsemblPlantsGene:VIT_05s0020g03320	EnsemblPlants:VIT_05s0020g03320.t01	RefSeq:XP_002278327
RefSeq:XP_002278327.1	SEG:seg	:	:	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:D7T6W8]

Coordinates

chr5:-:5085522..5088671

Molecular Weight (calculated)

76747.5 Da

IEP (calculated)

6.405

GRAVY (calculated)

-0.225

Length

676 amino acids

Sequence
(BLAST)

001: MAPACNTLFF FLFFTFPLSI FSAASIHFHH PLDPLTLQEL DQVRTIITAS HHNLTFHYVG LDEPDKSIVV SWLAHRTTAK TPPRRALVIA RLNHQTHQFI
101: VDLSTHSIVS DEIYSGSGFP MLTFEEQTAA NSLALTHAPF RASVGRRGLK MEEIVGLSYT VGWYGEEGTS RRIVKVMFCY LDGTVNLYMR PIEGITVTVD
201: LDEMKVIAYH DRLMVPVPKA DGTDFRESKQ KPPFGPRLKG ITVVQPDGPS FTIHGHQISW ANWDFHLAFD MRAGPIISVA SIYDVEKKEQ RRVLYRGYIS
301: ELFVPYMDLT EEWYFRTFFD AGEYGFGLCA MPLQPLTDCP ENAVFMDGYV TGQNGTPVNM TNVFCIFERY AGDIMWRHTE AEIPGKLITE SRPEVSLVVR
401: MVSAVGNYDY IIDWEFLQSG SIKLSVGLSG VLEVRGTTYT HVDQIHEEVY GTLLADNTLG AYHDHFLTYH LDLDVDGDTN SFVKSNLRKT LVSGNRSPRR
501: SYWTVVSETA KRESDAKIQL GLKPAELLVV NPNKRTKVGN YVGYRLIPGS VVGPLLTDDD YSQRRGAFTR YNVWVTPYNK SEKWVGGLYT DQSRGDDTLA
601: QWSLRDREIE NKDIVMWYTM GFHHVPYQED FPLMPTISGG FELRPSNFFD SNPVLKVKPP RQVKWPSCPT SISDLP

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.