CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04405	Canola	cytosol	57.23	35.83
VIT_05s0094g01210.t01	Wine grape	cytosol	67.92	33.44
CDY25701	Canola	cytosol	96.86	27.21
AT1G62810.1	Thale cress	extracellular, plasma membrane	91.82	20.51
CDY32205	Canola	extracellular, vacuole	79.87	19.66
CDY27138	Canola	cytosol	44.03	18.62
GSMUA_Achr1P19790_001	Banana	extracellular, vacuole	62.89	14.43
CDY04409	Canola	extracellular, plasma membrane	59.75	12.79
CDX97351	Canola	extracellular, plasma membrane	59.75	12.79
CDY27135	Canola	cytosol	42.14	12.38
CDX97353	Canola	cytosol	27.67	10.78
CDY56663	Canola	extracellular, golgi, vacuole	40.25	10.22
CDY54865	Canola	extracellular, golgi	41.51	10.15
CDY50266	Canola	extracellular, golgi	41.51	10.15
CDY53724	Canola	extracellular	6.29	8.13
CDY14839	Canola	peroxisome, plastid	22.64	4.65
CDY47975	Canola	peroxisome	22.64	4.65
CDY35376	Canola	plastid	22.64	3.38
CDY22564	Canola	peroxisome, plastid	22.64	3.35
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	1.89	0.74
CDY53725	Canola	cytosol	0.0	0.0
CDX77547	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.70.98.20	MapMan:35.1	GO:A0A078JWD8	UniProt:A0A078JWD8	EnsemblPlants:CDY69801	ProteinID:CDY69801
ProteinID:CDY69801.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00092748001	InterPro:IPR036460
PFAM:PF01179	PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	UniParc:UPI0004EDC76D	:

Description

BnaC04g54940DAmine oxidase [Source:UniProtKB/TrEMBL;Acc:A0A078JWD8]

Coordinates

chrLK040376:-:1958..3722

Molecular Weight (calculated)

17982.4 Da

IEP (calculated)

5.615

GRAVY (calculated)

-0.433

Length

159 amino acids

Sequence
(BLAST)

001: MICLFERYAG DVSWRHSEIL IPSADIRESR PKVTLVARMA TSVGNYDYTF DWEFQTDGLI RVTVAASGML MVKGTPYENV DDLGDKEDDS GPLISENVIG
101: VVHDHFITFH LDMDIDGPMN NSFDKVHPEK QRVPTGKSPR KSYLKVKKYV AKTEKDAQV

Best Arabidopsis Sequence Match ( AT1G62810.1 )
(BLAST)

001: MAEPSFARLF LLFFSFLLIF ATYSWVFGPD SGFLFGTRVR KTLGSNRQVH VDHSLEKPHH PLDPLTVREI NRVRTILSNH DPGFGSGSAT IHSMALDEPE
101: KSRVVQWKKG NKLLSRRAAV VAYWGGQTHE ITVDLDSGRV VSDVINRTSG YPILTLNDVF AASQVPLKSL EFNRSIEARG VKFSDLACIT PFAGWFGSEE
201: EGRRVIRVQC FTLQGTTNYF MRPLEGLYVT VDLDKLEVIK IIDKGPIPIP KASGTEYRFG VQNKPVHMDR INPISMEQPD GPSFRVEDGH LVKWANWVFH
301: VKADQRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPEEGWYYK GYMDAGELGL GPTAMPLVPL NDCPRNSYYI DGVFASPDGK PIVQPNMICL
401: FERYAGDISW RHSEILFANA DIRESRPKVT LVARMATSVG NYDYIFDWEF QTDGLIRVTV AASGMLMVKG TPYDNVDDLG DREDDAGPLI SENVIGVVHD
501: HFITFHLDMD IDGPMNNSLV KVHLEKQRVP TGKSPRKSYL KVKKYIAKTE KDAQIKLSLY DPYEFHIVNP NRKSRVGNPA GYRIVPGGNA ASLLDHDDPP
601: QIRGAFTNNQ IWVTPYNRSE QYAGGVLIYQ SQGDDTLQVW SDRDRSIENK DIVLWYTLGF HHVPCQEDYP VMPTVAASFE LKPANFFESN PILGSAPFFE
701: KDLPVCRPFA SS

Arabidopsis Description

Primary amine oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1H9]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.