CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70957	Soybean	extracellular, plasma membrane	78.87	78.29
KRH02147	Soybean	nucleus	69.35	69.14
KRH50986	Soybean	cytosol	21.88	64.47
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	9.08	59.8
KRG91282	Soybean	extracellular	58.33	58.07
KRG91283	Soybean	extracellular	57.14	56.89
KRG91286	Soybean	nucleus	56.7	56.28
KRG91287	Soybean	extracellular, golgi, vacuole	45.09	45.77
KRH35530	Soybean	extracellular, plasma membrane	44.94	43.52
KRH13980	Soybean	extracellular, golgi, vacuole	44.79	41.12
KRH32975	Soybean	extracellular, golgi, vacuole	44.64	40.87
KRH69629	Soybean	peroxisome	28.87	25.53
KRG99420	Soybean	plastid	29.02	25.52
KRH45608	Soybean	mitochondrion	28.72	25.2
KRH54329	Soybean	plastid	27.68	24.03
KRH74530	Soybean	cytosol	8.18	18.03
KRH03234	Soybean	nucleus	27.98	14.37

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100819571	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EMBL:ACUP02000118	InterPro:Cu_amine_oxidase
InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	EnsemblPlantsGene:GLYMA_01G062400
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008131	GO:GO:0008150
GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
UniProt:I1J635	InterPro:IPR036460	EnsemblPlants:KRH75095	ProteinID:KRH75095	ProteinID:KRH75095.1	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	ScanProsite:PS01164	PANTHER:PTHR10638	PANTHER:PTHR10638:SF36	SUPFAM:SSF49998
SUPFAM:SSF54416	SignalP:SignalP-noTM	UniParc:UPI0002336F97	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:8714119..8719741

Molecular Weight (calculated)

75726.8 Da

IEP (calculated)

5.977

GRAVY (calculated)

-0.257

Length

672 amino acids

Sequence
(BLAST)

001: MSMKLFQLFS LLPFFLYFYT IEAAVGPLQL THPLDPLTQQ EITLVKTIVL KKYPKPANRV FFHYVGLDDP DKAAVLKWLS SGARTPRNAF SIALINGQIH
101: ELTVNLLSPR NVVLDKIHTG NGFPTLTEEE QTEALELLPK YGPFLESLKK RGFNVSQVAC TTFSVGWFGE TKSTRTVKME CFLQDGSPNI YVRPISGITI
201: VADLETMKIV EYHDELITTV PKAENTEYRA SHLKPPFGPK LHSWSSRQPD GPGYTLDGHS ISWANWKFHI GFDERAGAVI STASIYDPEL HKSRSVLYRG
301: YISELFVPYQ DPTEEWYYKT FFDAGEFAFG KSMVSLVPLE DCPPHAQFLD AYFAATDGSP QHLENAICVF EQYGGISWRH TETGLDEIFT EVRTDVSLIV
401: RSIVTVGNYD NIVDWEFKTS GSIKPSISLS GILEVKPVDI THTDQIKEDQ HGTLVSANSI GVYHDHFYIF HLDFDIDGVE NSFVKTSLKT LQVTDNSSKR
501: KSYWTTSNEV VKTESDAKTK LGFSPAEIVI VNPNKKTSTG NEVGYRLVSN AAVHPLLTDD DYPQTRGAFT SYNVWVTPYN KTEKWAGGLY VDQSRGDDTL
601: AVWTKQNRGI ENKDIVMWYV VGIHHVPCQE DFPIMPLLST GFELRPTNFF ERNPVLKTLS PGIVKFPGCE KP

Best Arabidopsis Sequence Match ( AT1G31710.1 )
(BLAST)

001: MAPLHFTILI LFSFVIVVSS SSFTPPRHPF DPLTETELKL VRTIINKSYP VGPNHKFTFQ YVGLNEPNKS LVLSWYSSPN HTIKPPPRQA FVIARDNGKT
101: REIVLDFSSR AIVSDKIHVG NGYPMLSNDE QEASTELVVK FKPFIDSVAK RGLNVSEIVF TTSTIGWYGE TKAEAERVIR LMPFYLDGTV NMYLRPIEGM
201: TIIVNLDEMK VSEFKDRSVV TMPIANGTEY RISKLNPPFG PTLHNAVLLQ PDGPGFKVDG HIVRWANWEF HISFDVRAGI VISLASLFDT DVNKYRQVLY
301: KGHLSEMFIP YMDPSDDWYF ITYLDCGDFG CGQCAVSLQP YTDCPAGAVF MDGIFAGQDG TPAKIPKVMC IFEKYAGDIM WRHTEAEIPN LEITEVRPDV
401: SLVARIVTTV GNYDYIVDYE FKPSGSIKMG VGLTGVLEVK PVEYIHTSEI KLGEDIHGTI VADNTVGVNH DHFVTFRLHL DIDGTENSFV RNELVTTRSP
501: KSVNTPRKTY WTTKPKTAKT EAEARVKLGL KAEELVVVNP NRKTKHGNEV GYRLLHGSAA GPLLAQDDFP QIRAAFTNYN VWITPYNRSE VWAGGLYADR
601: SQGDDTLAVW SQRNRKIEKE DIVMWYTVGF HHVPSQEDYP TMPTLSGGFE LRPTNFFERN PVLKTKPVKV TTARKCTPKN D

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX1]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.