CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EER94456
EES09009
EES12364
OQU80420
OQU89852

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42490.1	EES09009	AT1G13520.1	21798944
AT2G42490.1	OQU80420	AT1G13520.1	21798944
AT2G42490.1	EES12364	AT2G42490.1	21798944
AT2G42490.1	OQU89852	AT2G42490.1	21798944
AT2G42490.1	EER94456	AT5G46570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P06650_001	Banana	peroxisome	79.25	72.21
GSMUA_Achr10P...	Banana	peroxisome	79.25	71.09
EES12364	Sorghum	peroxisome	84.59	68.8
KRH69629	Soybean	peroxisome	78.14	65.39
KRG99420	Soybean	plastid	78.46	65.31
KRH45608	Soybean	mitochondrion	77.99	64.75
VIT_00s0225g00090.t01	Wine grape	peroxisome	78.62	64.6
Solyc05g013440.2.1	Tomato	peroxisome, plastid	77.36	63.4
CDY14839	Canola	peroxisome, plastid	76.89	63.1
CDY47975	Canola	peroxisome	76.89	63.1
AT2G42490.1	Thale cress	peroxisome	76.89	63.02
VIT_17s0000g09100.t01	Wine grape	peroxisome	77.83	62.58
Solyc06g071700.1.1	Tomato	plastid	75.63	62.14
GSMUA_Achr6P12170_001	Banana	peroxisome	78.14	61.89
KRH54329	Soybean	plastid	75.31	61.89
Bra016871.1-P	Field mustard	plastid	76.1	61.5
PGSC0003DMT400059626	Potato	peroxisome	75.31	60.94
Solyc08g014330.2.1	Tomato	peroxisome, plastid	75.0	60.53
PGSC0003DMT400069411	Potato	plastid	64.62	59.57
KRH74530	Soybean	cytosol	23.43	48.85
CDY35376	Canola	plastid	76.57	45.73
CDY22564	Canola	peroxisome, plastid	76.73	45.4
KRH03234	Soybean	nucleus	72.96	35.47
EES05551	Sorghum	extracellular	27.2	24.86
OQU88787	Sorghum	extracellular	27.36	24.44
EER97410	Sorghum	extracellular, vacuole	25.94	23.24
EES10538	Sorghum	extracellular, golgi	27.2	23.01

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	UniProt:A0A1W0W650	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C
InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0055114
InterPro:IPR036460	EnsemblPlants:OQU89852	ProteinID:OQU89852	ProteinID:OQU89852.1	PFAM:PF01179	PFAM:PF02728
PANTHER:PTHR10638	PANTHER:PTHR10638:SF18	EnsemblPlantsGene:SORBI_3002G282600	SUPFAM:SSF49998	SUPFAM:SSF54416	TMHMM:TMhelix
UniParc:UPI0009DC87F5	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:66381242..66385008

Molecular Weight (calculated)

72493.0 Da

IEP (calculated)

6.538

GRAVY (calculated)

-0.289

Length

636 amino acids

Sequence
(BLAST)

001: MRFVEVVLLE PEKNVVALAD AYHFQPSVLP RMQGYDGVPS ILPPRRARLV VYNKLSNETS IWILELSEMH AAANEGGHET CNVISSEVVR DVQPAMDVME
101: DAECEAIVKS YPPFIEAMNK RGIDNMELVM VDAWFAGYYS KSDAPSRRLS KPLIFCRTEN CGPMDNGYAR PVEGIHIVVD MQNNVVTEFE DWKLIPLPPP
201: DHLRNYTPGE TRGGVDRSDV KPLIINQPEG PSFNVTGHFV EWQKWNFRIG FTPVEGLVIY SVAYNDGSLG RRPIAHRLSF VEMVVPYGDP NEPHCRKNAF
301: DAGEYGLGKC AHSLKKDCDC LGCIKYFDAH FTNFNGGVEI IKNCICLHEE DHGILWKHQD WRTGLAEVRR SRRLTASFIC TIANYEYGFY WHFYQDGKIE
401: AEIKLTGILS MGALMPGESR KYGTTIATGL YAPIHQHFFV ARMDMDVDCN PNEPHNQVVE VNVKVESAGP HNVHHNAFYA EEKLLKSELQ AVRDCDPLSK
501: RHWIVRNTRT VNRTRKLTGY KLMPGSNCKP MALPEAKFLR RAGFLKHNLW VTPYKSDEMF PGGDFPNQNP HIDEGLPTWV KKDRSLEETD IVLWYVFGLT
601: HIPRLEDWPV MPVEHIGFTL VVIVFKCLVF LYALCQ

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.