CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89430
EER89431
EES04804
KXG19616
OQU75612
OQU75930
OQU76071
OQU85385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13520.1	EES04804	AT2G42790.1	21798944
AT1G13520.1	EER89430	AT4G25200.1	21798944
AT1G13520.1	EER89431	AT4G25200.1	21798944
AT1G13520.1	KXG19616	AT4G25200.1	21798944
AT1G13520.1	OQU75612	AT4G25200.1	21798944
AT1G13520.1	OQU75930	AT4G25200.1	21798944
AT1G13520.1	OQU76071	AT4G25200.1	21798944
AT1G13520.1	OQU85385	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050302_P001	Maize	cytosol, plastid	84.1	83.2
Os08t0412700-01	Rice	cytosol, plasma membrane	74.66	73.28
TraesCS4D01G191600.1	Wheat	cytosol	67.92	64.12
TraesCS4A01G113900.1	Wheat	cytosol	67.39	63.78
TraesCS4B01G190200.1	Wheat	cytosol	67.39	63.13
GSMUA_Achr5P27350_001	Banana	mitochondrion	46.36	44.33
GSMUA_Achr5P27360_001	Banana	mitochondrion	45.28	43.75
GSMUA_Achr3P06220_001	Banana	cytosol	43.13	41.78
GSMUA_Achr9P18410_001	Banana	cytosol	39.89	38.74
VIT_01s0011g02320.t01	Wine grape	cytosol	38.27	36.32
Bra026901.1-P	Field mustard	cytosol	36.12	35.26
CDY26654	Canola	cytosol	35.58	34.74
CDY16094	Canola	cytosol	35.31	34.47
CDY50165	Canola	cytosol	35.31	34.2
Solyc05g010460.2.1	Tomato	cytosol, nucleus, peroxisome	36.39	34.01
CDY21100	Canola	cytosol	35.04	33.68
Bra016728.1-P	Field mustard	cytosol	35.04	33.68
CDY21099	Canola	cytosol	34.77	33.59
CDY50167	Canola	cytosol	35.04	33.59
Solyc05g010470.2.1	Tomato	cytosol	28.57	33.54
KRH71102	Soybean	cytosol	34.5	33.51
CDY26653	Canola	cytosol	31.81	33.15
PGSC0003DMT400019462	Potato	cytosol	35.04	32.91
VIT_01s0011g02330.t01	Wine grape	cytosol, mitochondrion	35.04	32.91
AT1G13520.1	Thale cress	cytosol	34.23	32.82
AT1G13470.1	Thale cress	cytosol	33.42	32.72
CDX98103	Canola	cytosol	32.61	32.7
PGSC0003DMT400019458	Potato	cytosol	29.65	32.54
AT1G13490.2	Thale cress	cytosol	33.42	32.46
Bra026902.1-P	Field mustard	cytosol	33.15	32.37
AT1G13510.1	Thale cress	cytosol	33.15	32.37
Bra019719.1-P	Field mustard	cytosol	33.15	32.28
AT1G13530.1	Thale cress	cytosol	33.42	32.21
EES09009	Sorghum	cytosol	38.27	32.05
Solyc02g089650.2.1	Tomato	mitochondrion	34.23	31.91
CDY30029	Canola	cytosol	32.61	31.76
AT1G13480.1	Thale cress	nucleus	32.88	31.52
PGSC0003DMT400026205	Potato	mitochondrion	33.69	31.41
CDY16092	Canola	cytosol	23.99	31.34
AT1G13540.1	Thale cress	cytosol	32.08	31.23
AT1G13500.1	Thale cress	cytosol	32.34	31.09
KRH71091	Soybean	cytosol	33.15	31.06
CDY50164	Canola	cytosol	32.08	30.67
AT1G13550.1	Thale cress	cytosol	31.54	30.15
CDY21101	Canola	cytosol, mitochondrion	31.54	30.15
Bra016727.1-P	Field mustard	cytosol	31.54	30.15
CDY47587	Canola	nucleus	14.82	30.05
PGSC0003DMT400059315	Potato	cytosol	22.1	29.39
KRG93807	Soybean	mitochondrion, nucleus	31.54	28.82
CDY15029	Canola	cytosol, mitochondrion	32.88	28.77
AT1G61600.1	Thale cress	cytosol	32.08	28.27
KRH63067	Soybean	cytosol, golgi, mitochondrion, nucleus	25.07	27.6
CDY16093	Canola	cytosol	25.07	27.03
CDY26655	Canola	cytosol	28.3	26.79
Bra026900.1-P	Field mustard	cytosol	28.3	26.79
CDY48822	Canola	cytosol	15.09	26.67
CDY16095	Canola	cytosol	28.03	26.46
CDY26357	Canola	mitochondrion	32.34	25.48
Bra038594.1-P	Field mustard	nucleus	32.08	25.27

Protein Annotations

EnsemblPlants:OQU80420	EnsemblPlantsGene:SORBI_3007G125100	InterPro:DUF1262	PANTHER:PTHR31050	PANTHER:PTHR31050:SF0	PFAM:PF06880
ProteinID:OQU80420	ProteinID:OQU80420.1	UniParc:UPI000B8B96A3	UniProt:A0A1Z5R9I3	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr7:+:53475709..53476848

Molecular Weight (calculated)

41290.4 Da

IEP (calculated)

7.378

GRAVY (calculated)

-0.461

Length

371 amino acids

Sequence
(BLAST)

001: MYATKPLSLF KSHPEAASRP PPEGRNSGYL VVKGADDDGS DDETCCWGTC GGSRNRVLTV RYTEQHGESS TTYADAVVFV PVPDQPLASN RYYPVIATGR
101: HRGLVRACSA EEDMVPCCFC RCINDVDPRP FDPADIYQQV EIVQRRRGRF TARAVAPDGF PYFLYRKKYW RVYASKPKSF DLQIGEAGGL DAALRSRQLS
201: DASVLDAFPA PTNGAVGKWY SPFFLVKEDG VAPREQMGRS AFYEVTLEQR WWEPEPVDAH SGGGSKLASK RAYIGGSVEA KQEAGNSRHG DDAFVWFRAA
301: ATGQRVALCT SVWERMRWEE YRGGWVDEDE DAGKVAGGSV LVERFVVKRL DGTVVVAFDF VHLNKVRTKQ L

Best Arabidopsis Sequence Match ( AT1G13520.1 )
(BLAST)

001: MYVTRHLSEY QRNSSDLTRS LPEGPNSGVL VIQDEESKPT CCFGNCYDGE LKGLPFPQNA KLTVTYRTGT GNDRRSYHDQ VLFIPVLDQP YYSNRYYVIK
101: RRGKQSGGAS ASAKEEDRVP CCFCFSYVPE VKPQEADPYD IYQQFEVHQR KPSSGYYTAT SVAPNGIPPE FLKRKYWTVE YSNSQDFGLT DDAKGINTTL
201: RSKLPNDMNT SVVVGKWYVP FIFVKERDAK DQIKSSPYYS MTLKQRWEEV YSCVNVNYNQ KGGEVVVDVD VETQVVKLEG QETISRETSG GGFVWFSVLG
301: DERQDKKIGL GSVVVERMKW EEERFGWLNN GERSNIKRSE RFEGGSSHWK SYRCLVLIES FELKRMDGSL VLTYEFTHVD KLKSKWD

Arabidopsis Description

At1g13520 [Source:UniProtKB/TrEMBL;Acc:Q6NNH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.