Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98103 | Canola | cytosol | 93.18 | 95.95 |
| Bra019719.1-P | Field mustard | cytosol | 95.28 | 95.28 |
| AT1G13530.1 | Thale cress | cytosol | 81.63 | 80.78 |
| AT1G13500.1 | Thale cress | cytosol | 78.48 | 77.46 |
| AT1G13490.2 | Thale cress | cytosol | 76.64 | 76.44 |
| CDY50165 | Canola | cytosol | 65.62 | 65.27 |
| CDY21100 | Canola | cytosol | 65.09 | 64.25 |
| CDY21099 | Canola | cytosol | 63.25 | 62.76 |
| CDY26653 | Canola | cytosol | 58.53 | 62.64 |
| CDY16094 | Canola | cytosol | 62.47 | 62.63 |
| CDY26654 | Canola | cytosol | 61.94 | 62.11 |
| CDY50167 | Canola | cytosol | 62.73 | 61.76 |
| CDY16092 | Canola | cytosol | 43.83 | 58.8 |
| CDY50164 | Canola | cytosol | 57.22 | 56.19 |
| CDY21101 | Canola | cytosol, mitochondrion | 56.69 | 55.67 |
| CDY16095 | Canola | cytosol | 50.92 | 49.36 |
| CDY26655 | Canola | cytosol | 50.13 | 48.72 |
| CDY16093 | Canola | cytosol | 39.9 | 44.19 |
| PGSC0003DMT400019462 | Potato | cytosol | 45.41 | 43.8 |
| VIT_01s0011g02320.t01 | Wine grape | cytosol | 44.88 | 43.73 |
| PGSC0003DMT400019458 | Potato | cytosol | 37.01 | 41.72 |
| KRH71091 | Soybean | cytosol | 43.31 | 41.67 |
| VIT_01s0011g02330.t01 | Wine grape | cytosol, mitochondrion | 43.04 | 41.52 |
| KRH71102 | Soybean | cytosol | 41.47 | 41.36 |
| Solyc05g010460.2.1 | Tomato | cytosol, nucleus, peroxisome | 42.26 | 40.55 |
| KRH63067 | Soybean | cytosol, golgi, mitochondrion, nucleus | 35.43 | 40.06 |
| PGSC0003DMT400059315 | Potato | cytosol | 29.13 | 39.78 |
| Solyc05g010470.2.1 | Tomato | cytosol | 32.81 | 39.56 |
| GSMUA_Achr5P27360_001 | Banana | mitochondrion | 38.85 | 38.54 |
| GSMUA_Achr5P27350_001 | Banana | mitochondrion | 39.11 | 38.4 |
| GSMUA_Achr3P06220_001 | Banana | cytosol | 37.01 | 36.81 |
| Os08t0413100-00 | Rice | cytosol, plasma membrane | 39.37 | 36.14 |
| Os08t0413500-00 | Rice | cytosol, plasma membrane | 38.58 | 36.12 |
| Os08t0413200-00 | Rice | cytosol | 39.9 | 36.1 |
| GSMUA_Achr9P18410_001 | Banana | cytosol | 34.91 | 34.82 |
| CDY15029 | Canola | cytosol, mitochondrion | 38.32 | 34.43 |
| CDY48822 | Canola | cytosol | 18.64 | 33.81 |
| EES09009 | Sorghum | cytosol | 38.58 | 33.18 |
| Zm00001d050302_P001 | Maize | cytosol, plastid | 32.55 | 33.07 |
| OQU80420 | Sorghum | cytosol | 31.76 | 32.61 |
| Os08t0412800-01 | Rice | plasma membrane | 32.81 | 32.47 |
| Os08t0412700-01 | Rice | cytosol, plasma membrane | 31.76 | 32.01 |
| CDY47587 | Canola | nucleus | 15.22 | 31.69 |
| CDY26357 | Canola | mitochondrion | 38.06 | 30.79 |
| TraesCS7D01G441700.1 | Wheat | cytosol | 36.22 | 30.26 |
| TraesCS4A01G113900.1 | Wheat | cytosol | 30.18 | 29.34 |
| TraesCS4D01G191600.1 | Wheat | cytosol | 30.18 | 29.26 |
| TraesCS4B01G190200.1 | Wheat | cytosol | 30.18 | 29.04 |
Protein Annotations
| EnsemblPlants:CDY30029 | EnsemblPlantsGene:GSBRNA2T00044564001 | InterPro:DUF1262 | PANTHER:PTHR31050 | PANTHER:PTHR31050:SF2 | PFAM:PF06880 |
| ProteinID:CDY30029 | ProteinID:CDY30029.1 | SEG:seg | UniParc:UPI0004EEFD0F | UniProt:A0A078GY51 | MapMan:35.2 |
Description
BnaC05g09910DBnaC05g09910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY51]
Coordinates
chrLK032248:+:6350..8336
Molecular Weight (calculated)
43518.6 Da
IEP (calculated)
6.101
GRAVY (calculated)
-0.458
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVTKRLTEY QRNPSELTLQ AEGPNSGVLV IQDEESQPKC CFGKCFDCDL NGLPFPQNAK VTVKYQIGRG DDRIVLLDSV AFIPVLHQPP SSNLYYVIRR
101: RGKHTGEACV SAKEGDRAPC CFCFSYIPNA TPRPLDPYDT YQQFEIHQRG SSTSKFFATS AASDGIPPRF LRRKGWTVPF SSSEDFGLVD DAKGVVDAKL
201: RYELPDLDKS VVVGKWYVPF LFVKEGDAKD QMMRSMYYSM TLHQRFEEVF LCENVEDKQF EAVVDVEVET EVVKLGGGEI AREAKGVDSD KVVWFSVSGT
301: EEKIGLGSVV LEQMKWEEER FGWSKIRSSI KRSERFEGGG PYWKSYRCYL LVESFELRRN DGSLVLTYEF KHVDKLKSKW N
101: RGKHTGEACV SAKEGDRAPC CFCFSYIPNA TPRPLDPYDT YQQFEIHQRG SSTSKFFATS AASDGIPPRF LRRKGWTVPF SSSEDFGLVD DAKGVVDAKL
201: RYELPDLDKS VVVGKWYVPF LFVKEGDAKD QMMRSMYYSM TLHQRFEEVF LCENVEDKQF EAVVDVEVET EVVKLGGGEI AREAKGVDSD KVVWFSVSGT
301: EEKIGLGSVV LEQMKWEEER FGWSKIRSSI KRSERFEGGG PYWKSYRCYL LVESFELRRN DGSLVLTYEF KHVDKLKSKW N
001: MYVTKRLSEY QRNPSELTFL PTEGPNSGVL VIQDEESQPT CCFGKCFGCD LNGLPFPQNT RVTVKYQIGH GDDRIVLLDS VAFIPVLHQP PSSNLYYVIR
101: RRGKHAGEAC VSAKEEDKVS CCLCFTYVSN ATPRLLDPFD IYQQFEIHQR GSSTRKFFAT SVASDGIPPR FLRRKGWTVP FSASQDYGLI DDAKGVVDAK
201: LRYELPDFGK SVVVGKWYVP FLFVKEGDAK DQMKKSMYYS MTLHQRFEEV FFCENVDNKN CEVIVDVEVE TEVVKLEGEN IGRETKGVNS DGVVWFGVSE
301: TQKIGIGSVV LERMKWEEER FGWSKKGNEL KSSIKRTEKF EGGGPQWKSY RCYVLVETFE LKKTDGSLVL TYEFRHVDKL KSKWD
101: RRGKHAGEAC VSAKEEDKVS CCLCFTYVSN ATPRLLDPFD IYQQFEIHQR GSSTRKFFAT SVASDGIPPR FLRRKGWTVP FSASQDYGLI DDAKGVVDAK
201: LRYELPDFGK SVVVGKWYVP FLFVKEGDAK DQMKKSMYYS MTLHQRFEEV FFCENVDNKN CEVIVDVEVE TEVVKLEGEN IGRETKGVNS DGVVWFGVSE
301: TQKIGIGSVV LERMKWEEER FGWSKKGNEL KSSIKRTEKF EGGGPQWKSY RCYVLVETFE LKKTDGSLVL TYEFRHVDKL KSKWD
Arabidopsis Description
Protein of unknown function (DUF1262) [Source:TAIR;Acc:AT1G13530]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.