Factsheet for AT1G13490.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G13500.1	Thale cress	cytosol	82.46	81.61
AT1G13530.1	Thale cress	cytosol	80.37	79.74
CDY30029	Canola	cytosol	76.44	76.64
CDX98103	Canola	cytosol	73.82	76.22
Bra019719.1-P	Field mustard	cytosol	75.13	75.33
AT1G13480.1	Thale cress	nucleus	63.61	62.79
AT1G13470.1	Thale cress	cytosol	59.69	60.16
AT1G13520.1	Thale cress	cytosol	60.73	59.95
AT1G13540.1	Thale cress	cytosol	56.81	56.96
AT1G13510.1	Thale cress	cytosol	55.76	56.05
AT1G13550.1	Thale cress	cytosol	54.97	54.12
PGSC0003DMT400019462	Potato	cytosol	45.81	44.3
VIT_01s0011g02320.t01	Wine grape	cytosol	45.03	43.99
PGSC0003DMT400019458	Potato	cytosol	38.22	43.2
Solyc05g010460.2.1	Tomato	cytosol, nucleus, peroxisome	43.19	41.56
VIT_01s0011g02330.t01	Wine grape	cytosol, mitochondrion	42.67	41.27
KRH71091	Soybean	cytosol	42.67	41.16
Solyc05g010470.2.1	Tomato	cytosol	34.03	41.14
KRH71102	Soybean	cytosol	41.1	41.1
PGSC0003DMT400059315	Potato	cytosol	29.58	40.5
KRH63067	Soybean	cytosol, golgi, mitochondrion, nucleus	35.6	40.36
GSMUA_Achr3P06220_001	Banana	cytosol	37.96	37.86
GSMUA_Achr5P27360_001	Banana	mitochondrion	37.7	37.5
GSMUA_Achr5P27350_001	Banana	mitochondrion	37.96	37.37
GSMUA_Achr9P18410_001	Banana	cytosol	36.39	36.39
Os08t0413200-00	Rice	cytosol	39.27	35.63
Os08t0413500-00	Rice	cytosol, plasma membrane	37.96	35.63
AT1G61600.1	Thale cress	cytosol	37.7	34.2
Zm00001d050302_P001	Maize	cytosol, plastid	33.51	34.13
Os08t0413100-00	Rice	cytosol, plasma membrane	36.91	33.98
OQU80420	Sorghum	cytosol	32.46	33.42
Os08t0412700-01	Rice	cytosol, plasma membrane	32.2	32.54
EES09009	Sorghum	cytosol	37.7	32.51
Os08t0412800-01	Rice	plasma membrane	32.2	31.95
TraesCS7D01G441700.1	Wheat	cytosol	37.43	31.36
TraesCS4D01G191600.1	Wheat	cytosol	31.15	30.28
TraesCS4A01G113900.1	Wheat	cytosol	30.89	30.1
TraesCS4B01G190200.1	Wheat	cytosol	31.15	30.05

Protein Annotations

ArrayExpress:AT1G13490	EnsemblPlants:AT1G13490.2	EnsemblPlantsGene:AT1G13490	EntrezGene:837909	InterPro:DUF1262	PANTHER:PTHR31050
PANTHER:PTHR31050:SF2	PFAM:PF06880	ProteinID:AAF99819.1	ProteinID:ANM60698.1	RefSeq:AT1G13490	RefSeq:AT1G13490-TAIR-G
RefSeq:NP_001322967.1	SEG:seg	TAIR:AT1G13490	Unigene:At.51595	UniParc:UPI00000A5523	UniProt:Q9FZ74
MapMan:35.2	:	:	:	:	:

Description

F13B4.1 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ74]

Coordinates

chr1:-:4624564..4626166

Molecular Weight (calculated)

43550.7 Da

IEP (calculated)

5.772

GRAVY (calculated)

-0.402

Length

382 amino acids

Sequence
(BLAST)

001: MYVTKRLSEY QKNPSELTSL PTEGPNSGVL VIQDEESRTP CCFGKCFDWK LHGLPFPQNT KVTVRFQVGK VVYLDPVAFI PVLHQPLSSN LYYVIRQSGK
101: QTGEACVSAT EGDKTSCCIC FSFIPDADPR PLDPFDIYQQ FEIHQRGSSN QKFFATSVAS EGIPPQFLTR KGWVAASLPF EEYGLIDDAK GVVDAKLRYE
201: LPDLDKSVVV GKWYVPFLFV KEGGDANDQM NKSMYYSMTL QQRFEEVFFC ENIGNNKHFE VVVDVEVETE VVKLEGDKIA RETKGVNSDG VVWFSVSGTQ
301: KIGLGSVVLE RMKWEEERFG WSKKDELRSS IKRTEKFEGG GPHWKSYRCY VLVETFELKR TDGSLVLTYE FKHVDKLKSK WD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.