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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • golgi 2
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 3
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG98876
KRH14452
KRH23958
KRH39841
KRH46090
KRH73702

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G13520.1 KRG98876 AT2G42790.1 21798944
AT1G13520.1 KRH14452 AT2G42790.1 21798944
AT1G13520.1 KRH46090 AT2G42790.1 21798944
AT1G13520.1 KRH73702 AT2G42790.1 21798944
AT1G13520.1 KRH23958 AT4G25200.1 21798944
AT1G13520.1 KRH39841 AT4G25200.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH63067 Soybean cytosol, golgi, mitochondrion, nucleus 71.72 84.27
VIT_01s0011g02320.t01 Wine grape cytosol 52.27 52.94
VIT_01s0011g02330.t01 Wine grape cytosol, mitochondrion 52.53 52.66
KRH71102 Soybean cytosol 50.0 51.83
PGSC0003DMT400019462 Potato cytosol 48.48 48.61
PGSC0003DMT400059315 Potato cytosol 33.33 47.31
PGSC0003DMT400019458 Potato cytosol 40.15 47.04
Solyc05g010460.2.1 Tomato cytosol, nucleus, peroxisome 46.46 46.35
Bra026901.1-P Field mustard cytosol 43.94 45.79
AT1G13530.1 Thale cress cytosol 44.19 45.45
CDY26654 Canola cytosol 43.43 45.26
Solyc05g010470.2.1 Tomato cytosol 36.11 45.25
AT1G13470.1 Thale cress cytosol 43.18 45.12
CDY16094 Canola cytosol 43.18 45.0
CDX98103 Canola cytosol 41.16 44.05
AT1G13500.1 Thale cress cytosol 42.93 44.04
AT1G13480.1 Thale cress nucleus 42.93 43.93
CDY26653 Canola cytosol 39.39 43.82
AT1G13520.1 Thale cress cytosol 42.68 43.67
Bra016728.1-P Field mustard cytosol 42.42 43.52
Bra019719.1-P Field mustard cytosol 41.67 43.31
CDY30029 Canola cytosol 41.67 43.31
CDY21100 Canola cytosol 42.17 43.26
Bra026902.1-P Field mustard cytosol 41.41 43.16
CDY21099 Canola cytosol 41.67 42.97
AT1G13510.1 Thale cress cytosol 41.16 42.89
CDY50165 Canola cytosol 41.41 42.82
AT1G13490.2 Thale cress cytosol 41.16 42.67
CDY21101 Canola cytosol, mitochondrion 41.41 42.27
CDY50164 Canola cytosol 41.16 42.01
Bra016727.1-P Field mustard cytosol 41.16 42.01
AT1G13540.1 Thale cress cytosol 40.4 41.99
GSMUA_Achr5P27360_001 Banana mitochondrion 40.66 41.93
GSMUA_Achr5P27350_001 Banana mitochondrion 40.66 41.49
CDY50167 Canola cytosol 39.39 40.31
CDY16092 Canola cytosol 28.79 40.14
AT1G13550.1 Thale cress cytosol 39.14 39.95
KRG93807 Soybean mitochondrion, nucleus 40.66 39.66
GSMUA_Achr9P18410_001 Banana cytosol 36.62 37.96
Bra026900.1-P Field mustard cytosol 37.37 37.76
CDY26655 Canola cytosol 37.37 37.76
CDY16095 Canola cytosol 37.12 37.4
GSMUA_Achr3P06220_001 Banana cytosol 36.11 37.34
Os08t0413100-00 Rice cytosol, plasma membrane 38.89 37.11
Os08t0413200-00 Rice cytosol 38.64 36.34
Os08t0413500-00 Rice cytosol, plasma membrane 35.86 34.89
Zm00001d050302_P001 Maize cytosol, plastid 32.32 34.13
Os08t0412700-01 Rice cytosol, plasma membrane 31.82 33.33
OQU80420 Sorghum cytosol 31.06 33.15
CDY16093 Canola cytosol 28.79 33.14
TraesCS7D01G441700.1 Wheat cytosol 37.37 32.46
TraesCS4B01G190200.1 Wheat cytosol 32.07 32.07
TraesCS4D01G191600.1 Wheat cytosol 31.82 32.06
TraesCS4A01G113900.1 Wheat cytosol 31.57 31.89
Os08t0412800-01 Rice plasma membrane 30.81 31.69
EES09009 Sorghum cytosol 35.35 31.6
Protein Annotations
EMBL:ACUP02000858EnsemblPlants:KRH71091EnsemblPlantsGene:GLYMA_02G128800InterPro:DUF1262PANTHER:PTHR31050PANTHER:PTHR31050:SF2
PFAM:PF06880ProteinID:KRH71091ProteinID:KRH71091.1SEG:segUniParc:UPI0002337A4BUniProt:I1JEQ1
MapMan:35.2:::::
Description
hypothetical protein
Coordinates
chr2:+:13148102..13150151
Molecular Weight (calculated)
44960.5 Da
IEP (calculated)
6.608
GRAVY (calculated)
-0.312
Length
396 amino acids
Sequence
(BLAST)
001: MYVTRPLSLY KKSADALSLP PPEGPNSGIL VIQDEDLVPT SCFGLGEFHE VKELPFPQNL NLELFYRSGI SLNRTTHYHH VAFIPVLNQP LSSNKYYVIN
101: LSGKKRGEAY INSKGEDLDT FCFYNAVSDV PLHPIVINDT YQEFEIFPRR SKVTFRSGFS AKSVAPDGYP PRFLSTRWKV SASTSSDSSL GEASGVNETL
201: RASKPEFQFS LAKKSSDSVV VGKWYCPFMF IKEGTHKTLK EEMRKSMFYE MTLEQKWEQI FSCENEYGMG NTVNVDVVVQ KEVVVIAGWE AVINEMDIAE
301: GFVWFNSVNN VGEKSSVGLS TAVVERMKWE QERVGWNGGI EKQIRVKKVE EFEGTNGWKK FGCFVLVETF ILKTLDGSIV LTHAFKHHDQ LRSKWE
Best Arabidopsis Sequence Match ( AT1G13480.1 )
(BLAST)
001: MYVTRRLSEY QKKPSELKLL PPEGPNSGIM VIQDEESQAT CCFGSCYEGR LKGLPFPQNV KLNAAYTSGG GEHQTTHLTP VVFIPVLDQP LSSNLYYVLQ
101: RRGKHTGKAS ASATEEERVS SCFCFSYIPD AKPQEADPYD IYQQFEIHQR RSSSRYYSAT SVASDGVPPN YLKRKDWWVS YSTSHDFGLR DDAKGINTKL
201: RLDSELTSLG KSIEIGKWYV PFIFVMEGDV KDQMNKSTFY SVTLQQRWEE VFFCENIGNE HFEVVVDVDV ETESVKLEGQ ETNLREDSGD GVVWFSVLRD
301: EKDDKKIGLG SVVVERMKWE EERFGWLNEA GERSNIKRSE RFEGGSSHWK SYRCYVLIES FELTRMDGSL VLTYEFRHVD KLKSKWD
Arabidopsis Description
At1g13480 [Source:UniProtKB/TrEMBL;Acc:Q56Y29]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.