CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026900.1-P	Field mustard	cytosol	99.74	99.74
CDY16095	Canola	cytosol	96.17	95.93
AT1G13550.1	Thale cress	cytosol	82.65	83.51
CDY21100	Canola	cytosol	54.59	55.44
CDY50165	Canola	cytosol	53.32	54.57
CDY16094	Canola	cytosol	52.81	54.47
CDY26654	Canola	cytosol	52.81	54.47
CDY21099	Canola	cytosol	53.06	54.17
CDY26653	Canola	cytosol	48.47	53.37
CDY50167	Canola	cytosol	52.04	52.71
CDY21101	Canola	cytosol, mitochondrion	52.04	52.58
CDY50164	Canola	cytosol	51.28	51.8
CDX98103	Canola	cytosol	48.47	51.35
CDY30029	Canola	cytosol	48.72	50.13
CDY16092	Canola	cytosol	35.97	49.65
CDY16093	Canola	cytosol	36.48	41.57
PGSC0003DMT400019462	Potato	cytosol	41.07	40.76
VIT_01s0011g02320.t01	Wine grape	cytosol	39.54	39.64
Solyc05g010460.2.1	Tomato	cytosol, nucleus, peroxisome	38.78	38.29
PGSC0003DMT400019458	Potato	cytosol	32.65	37.87
KRH63067	Soybean	cytosol, golgi, mitochondrion, nucleus	32.4	37.69
KRH71102	Soybean	cytosol	36.48	37.43
KRH71091	Soybean	cytosol	37.76	37.37
VIT_01s0011g02330.t01	Wine grape	cytosol, mitochondrion	37.24	36.96
Solyc05g010470.2.1	Tomato	cytosol	28.83	35.76
PGSC0003DMT400059315	Potato	cytosol	24.49	34.41
CDY15029	Canola	cytosol, mitochondrion	36.48	33.73
GSMUA_Achr5P27360_001	Banana	mitochondrion	32.4	33.07
CDY48822	Canola	cytosol	17.6	32.86
GSMUA_Achr5P27350_001	Banana	mitochondrion	32.14	32.47
GSMUA_Achr3P06220_001	Banana	cytosol	31.38	32.11
Os08t0413200-00	Rice	cytosol	32.91	30.64
Os08t0413100-00	Rice	cytosol, plasma membrane	32.4	30.6
GSMUA_Achr9P18410_001	Banana	cytosol	29.59	30.37
Zm00001d050302_P001	Maize	cytosol, plastid	28.57	29.87
CDY26357	Canola	mitochondrion	35.46	29.51
CDY47587	Canola	nucleus	13.78	29.51
Os08t0412700-01	Rice	cytosol, plasma membrane	27.81	28.84
Os08t0413500-00	Rice	cytosol, plasma membrane	29.59	28.5
OQU80420	Sorghum	cytosol	26.79	28.3
Os08t0412800-01	Rice	plasma membrane	27.55	28.05
EES09009	Sorghum	cytosol	31.63	27.99
TraesCS4D01G191600.1	Wheat	cytosol	28.06	27.99
TraesCS4B01G190200.1	Wheat	cytosol	28.06	27.78
TraesCS4A01G113900.1	Wheat	cytosol	27.55	27.55
TraesCS7D01G441700.1	Wheat	cytosol	31.12	26.75

Protein Annotations

EnsemblPlants:CDY26655	EnsemblPlantsGene:GSBRNA2T00035535001	InterPro:DUF1262	PANTHER:PTHR31050	PANTHER:PTHR31050:SF2	PFAM:PF06880
ProteinID:CDY26655	ProteinID:CDY26655.1	UniParc:UPI0004EEBB17	UniProt:A0A078GJG2	MapMan:35.2	:

Description

BnaA09g46220DBnaA09g46220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJG2]

Coordinates

chrLK032192:-:514035..516996

Molecular Weight (calculated)

45215.2 Da

IEP (calculated)

6.908

GRAVY (calculated)

-0.332

Length

392 amino acids

Sequence
(BLAST)

001: MYVTRALSEY RKTPSELKKP PPEGPNSGVL VIQDEESLTT CCFGLCNETL FRGLPFPQNA ALTVIHNYGS HRDNVRRDPA VFIPVLGLPL SSNRYYTYER
101: CGYYSRESST STEKEVERVT CCFCIKFNHV HMYKKPQPDP YDIHRQVVIT TTSAPSCSYY QAKPVDPNAI LPAFLMQSWV IENSTSTLRD FGLTDDAKGL
201: NVELRSKLPG LDMSVVVGKW YVPFLFVKEG DIIDQVKISM YYNMTLQQRW EEVFFYENVR NEDCIQVVVD VNLEAQVIKV EGQKINIGTT YLDAKGIVWF
301: QVFDHEGKNK KIGLRSMIVE RMESVEENFG WKKIDGNLLT VKKLDRFECG SSHWKSYKCY VLVESFELKR MDGSLVLTYE FSHADKLRTI QY

Best Arabidopsis Sequence Match ( AT1G13550.1 )
(BLAST)

001: MYVTRRLSEY RKNPSELKKP PPEGPNSGVL VIQDEESLTT CCFGLCNEIF LRGLPFPQNA ALTVRRDDGG QNNTVHRDPV VFIPVLGQPL SSNRYYTYER
101: CGYYSRESST STEKEVERVT CCFCIRFNHV HMYKKPQPDP YDIHQQVVIT TTSSPSRCYY FAKPVAPNAL LPAFLMRQGW TIENSTSTLQ DFGLIDDAKG
201: LNLELRSKLP GLDISVVVGK WYVPFIFVKE GDIIDQVKIS MYYNMTLHQR WEEVFFYENV HNEDCVEVVV DVDLELQVIN IEGQKVSIET TNVDAKGIVW
301: FQVKDKKIGL RSVVVERMES EEESFGWKKV DGNRVTVKRL DRFEGGSSHW KSYKCYVLVE RFELKRMDES LVLTYEFRHA DKLRTIQY

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q3EDD3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.