Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026901.1-P | Field mustard | cytosol | 98.16 | 98.16 |
| CDY16094 | Canola | cytosol | 93.68 | 93.68 |
| CDY26653 | Canola | cytosol | 67.37 | 71.91 |
| CDY21100 | Canola | cytosol | 72.63 | 71.5 |
| CDY50165 | Canola | cytosol | 70.53 | 69.97 |
| CDY21099 | Canola | cytosol | 69.47 | 68.75 |
| CDY50167 | Canola | cytosol | 68.16 | 66.93 |
| CDY16092 | Canola | cytosol | 48.42 | 64.79 |
| CDY30029 | Canola | cytosol | 62.11 | 61.94 |
| CDY50164 | Canola | cytosol | 62.89 | 61.6 |
| CDX98103 | Canola | cytosol | 59.47 | 61.08 |
| CDY21101 | Canola | cytosol, mitochondrion | 62.11 | 60.82 |
| CDY26655 | Canola | cytosol | 54.47 | 52.81 |
| CDY16095 | Canola | cytosol | 54.47 | 52.67 |
| CDY16093 | Canola | cytosol | 45.79 | 50.58 |
| VIT_01s0011g02320.t01 | Wine grape | cytosol | 46.32 | 45.01 |
| KRH71102 | Soybean | cytosol | 44.74 | 44.5 |
| PGSC0003DMT400019462 | Potato | cytosol | 45.26 | 43.54 |
| KRH71091 | Soybean | cytosol | 45.26 | 43.43 |
| VIT_01s0011g02330.t01 | Wine grape | cytosol, mitochondrion | 44.47 | 42.78 |
| KRH63067 | Soybean | cytosol, golgi, mitochondrion, nucleus | 37.11 | 41.84 |
| Solyc05g010460.2.1 | Tomato | cytosol, nucleus, peroxisome | 43.16 | 41.31 |
| PGSC0003DMT400019458 | Potato | cytosol | 36.58 | 41.12 |
| Solyc05g010470.2.1 | Tomato | cytosol | 32.63 | 39.24 |
| GSMUA_Achr5P27360_001 | Banana | mitochondrion | 39.21 | 38.8 |
| GSMUA_Achr5P27350_001 | Banana | mitochondrion | 39.21 | 38.4 |
| GSMUA_Achr3P06220_001 | Banana | cytosol | 37.37 | 37.08 |
| CDY15029 | Canola | cytosol, mitochondrion | 41.32 | 37.03 |
| PGSC0003DMT400059315 | Potato | cytosol | 27.11 | 36.92 |
| GSMUA_Achr9P18410_001 | Banana | cytosol | 36.58 | 36.39 |
| CDY48822 | Canola | cytosol | 20.0 | 36.19 |
| Os08t0413200-00 | Rice | cytosol | 40.0 | 36.1 |
| Zm00001d050302_P001 | Maize | cytosol, plastid | 35.26 | 35.73 |
| OQU80420 | Sorghum | cytosol | 34.74 | 35.58 |
| Os08t0412700-01 | Rice | cytosol, plasma membrane | 35.26 | 35.45 |
| Os08t0413500-00 | Rice | cytosol, plasma membrane | 37.37 | 34.89 |
| Os08t0412800-01 | Rice | plasma membrane | 34.21 | 33.77 |
| Os08t0413100-00 | Rice | cytosol, plasma membrane | 36.84 | 33.73 |
| CDY47587 | Canola | nucleus | 16.05 | 33.33 |
| CDY26357 | Canola | mitochondrion | 41.05 | 33.12 |
| TraesCS7D01G441700.1 | Wheat | cytosol | 39.21 | 32.68 |
| TraesCS4B01G190200.1 | Wheat | cytosol | 33.95 | 32.58 |
| TraesCS4D01G191600.1 | Wheat | cytosol | 33.68 | 32.57 |
| TraesCS4A01G113900.1 | Wheat | cytosol | 33.42 | 32.4 |
| EES09009 | Sorghum | cytosol | 37.11 | 31.83 |
Protein Annotations
| EnsemblPlants:CDY26654 | EnsemblPlantsGene:GSBRNA2T00035534001 | InterPro:DUF1262 | PANTHER:PTHR31050 | PANTHER:PTHR31050:SF2 | PFAM:PF06880 |
| ProteinID:CDY26654 | ProteinID:CDY26654.1 | UniParc:UPI0004EE4DD3 | UniProt:A0A078GN50 | MapMan:35.2 | : |
Description
BnaA09g46230DBnaA09g46230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GN50]
Coordinates
chrLK032192:-:508120..509858
Molecular Weight (calculated)
43997.2 Da
IEP (calculated)
6.199
GRAVY (calculated)
-0.559
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVTRRLSEY QRNPLELEQR PPEGPNSGVL VIQDEESRPL SCFGLCYGQD LKGLPFPQNA KLTVSYSDGD DSYHDPVLFI PVLDQPLSSN CYYVIIRRGK
101: HSGKASASAK EEDRVPCCFC FNYVPEAKPR QADPYDIYQQ FEIHQRKSYY YSATSVAPDG VPPWFLKRKN WRAGYSTSQD FGLIDDAKGI NTMLRSKLPG
201: DFNTSVVVGK WYVPFIFVKE RDAKALIKKS TYYSMTLRQS WEEVYSCGNL DYKKENGEVV VDVEIESELV KLEGQVIGKE IRGVDENGVV WFEIAGKKIG
301: LRTMVVERMK WEEERFGWSK ETDDIKSSIK RSERFEGDAM LWQSYKCYVL VESFELKRMD GSLVLTFEFR HVDKLKNKWD
101: HSGKASASAK EEDRVPCCFC FNYVPEAKPR QADPYDIYQQ FEIHQRKSYY YSATSVAPDG VPPWFLKRKN WRAGYSTSQD FGLIDDAKGI NTMLRSKLPG
201: DFNTSVVVGK WYVPFIFVKE RDAKALIKKS TYYSMTLRQS WEEVYSCGNL DYKKENGEVV VDVEIESELV KLEGQVIGKE IRGVDENGVV WFEIAGKKIG
301: LRTMVVERMK WEEERFGWSK ETDDIKSSIK RSERFEGDAM LWQSYKCYVL VESFELKRMD GSLVLTFEFR HVDKLKNKWD
001: MYVTRHLSEY QRNSSDLTRS LPEGPNSGVL VIQDEESKPT CCFGNCYDGE LKGLPFPQNA KLTVTYRTGT GNDRRSYHDQ VLFIPVLDQP YYSNRYYVIK
101: RRGKQSGGAS ASAKEEDRVP CCFCFSYVPE VKPQEADPYD IYQQFEVHQR KPSSGYYTAT SVAPNGIPPE FLKRKYWTVE YSNSQDFGLT DDAKGINTTL
201: RSKLPNDMNT SVVVGKWYVP FIFVKERDAK DQIKSSPYYS MTLKQRWEEV YSCVNVNYNQ KGGEVVVDVD VETQVVKLEG QETISRETSG GGFVWFSVLG
301: DERQDKKIGL GSVVVERMKW EEERFGWLNN GERSNIKRSE RFEGGSSHWK SYRCLVLIES FELKRMDGSL VLTYEFTHVD KLKSKWD
101: RRGKQSGGAS ASAKEEDRVP CCFCFSYVPE VKPQEADPYD IYQQFEVHQR KPSSGYYTAT SVAPNGIPPE FLKRKYWTVE YSNSQDFGLT DDAKGINTTL
201: RSKLPNDMNT SVVVGKWYVP FIFVKERDAK DQIKSSPYYS MTLKQRWEEV YSCVNVNYNQ KGGEVVVDVD VETQVVKLEG QETISRETSG GGFVWFSVLG
301: DERQDKKIGL GSVVVERMKW EEERFGWLNN GERSNIKRSE RFEGGSSHWK SYRCLVLIES FELKRMDGSL VLTYEFTHVD KLKSKWD
Arabidopsis Description
At1g13520 [Source:UniProtKB/TrEMBL;Acc:Q6NNH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.