Factsheet for Bra026901.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26654	Canola	cytosol	98.16	98.16
Bra026902.1-P	Field mustard	cytosol	71.05	71.05
Bra016728.1-P	Field mustard	cytosol	72.11	70.98
Bra016727.1-P	Field mustard	cytosol	63.68	62.37
Bra019719.1-P	Field mustard	cytosol	62.11	61.94
Bra026900.1-P	Field mustard	cytosol	55.0	53.32
VIT_01s0011g02320.t01	Wine grape	cytosol	47.11	45.78
KRH71102	Soybean	cytosol	45.26	45.03
KRH71091	Soybean	cytosol	45.79	43.94
PGSC0003DMT400019462	Potato	cytosol	45.53	43.8
VIT_01s0011g02330.t01	Wine grape	cytosol, mitochondrion	45.26	43.54
KRH63067	Soybean	cytosol, golgi, mitochondrion, nucleus	37.63	42.43
PGSC0003DMT400019458	Potato	cytosol	37.63	42.31
Solyc05g010460.2.1	Tomato	cytosol, nucleus, peroxisome	43.42	41.56
Solyc05g010470.2.1	Tomato	cytosol	33.68	40.51
GSMUA_Achr5P27360_001	Banana	mitochondrion	39.21	38.8
GSMUA_Achr5P27350_001	Banana	mitochondrion	39.21	38.4
PGSC0003DMT400059315	Potato	cytosol	27.63	37.63
GSMUA_Achr9P18410_001	Banana	cytosol	37.37	37.17
GSMUA_Achr3P06220_001	Banana	cytosol	37.37	37.08
OQU80420	Sorghum	cytosol	35.26	36.12
Os08t0413200-00	Rice	cytosol	40.0	36.1
Zm00001d050302_P001	Maize	cytosol, plastid	35.26	35.73
Os08t0412700-01	Rice	cytosol, plasma membrane	35.53	35.71
Os08t0413500-00	Rice	cytosol, plasma membrane	37.63	35.14
Os08t0412800-01	Rice	plasma membrane	34.74	34.29
Os08t0413100-00	Rice	cytosol, plasma membrane	36.84	33.73
Bra038594.1-P	Field mustard	nucleus	41.05	33.12
TraesCS7D01G441700.1	Wheat	cytosol	39.21	32.68
TraesCS4B01G190200.1	Wheat	cytosol	33.95	32.58
TraesCS4D01G191600.1	Wheat	cytosol	33.68	32.57
TraesCS4A01G113900.1	Wheat	cytosol	33.42	32.4
EES09009	Sorghum	cytosol	37.11	31.83

Protein Annotations

EnsemblPlants:Bra026901.1	EnsemblPlants:Bra026901.1-P	EnsemblPlantsGene:Bra026901	InterPro:DUF1262	PANTHER:PTHR31050	PANTHER:PTHR31050:SF2
PFAM:PF06880	UniParc:UPI0002542EA1	UniProt:M4EDP1	MapMan:35.2	:	:

Description

AT1G13520 (E=2e-159) | unknown protein

Coordinates

chrA09:+:34207829..34209565

Molecular Weight (calculated)

43986.1 Da

IEP (calculated)

5.612

GRAVY (calculated)

-0.571

Length

380 amino acids

Sequence
(BLAST)

001: MYVTRRLSEY QRNPLELEQR PPEGPNSGVL VIQDEESRPL SCFGLCYGQD LKGLPFPQNA KLTVSYSDGD DSYHDPVLFI PVLDQPLSSN CYYVIIRRGK
101: HSGEASASAK EEDRVPCCFC FNYVPEAKPR QADPYDIYQQ FEIHQRKSYY YSATSVAPDG VPPWFLKRKN WRAGYSTSQD FGLIDDAKGI NTMLRSKLPG
201: DFNTSVVVGK WYVPFIFVKE RDAKAQIKKS TYYSMTLRQS WEEVYSCGNL DYKKENGEVV VDVEIESELV KLEGQVIGKE IRGVDENGVV WFEIAGKKIG
301: LRTMVVERMK WEEERFGWSK ETDDIKSSIK RSERFEGDAM LWQSYKCYVL VESFELKRMD GSLVLTFEFR HVDKLKSKWD

Best Arabidopsis Sequence Match ( AT1G13520.1 )
(BLAST)

001: MYVTRHLSEY QRNSSDLTRS LPEGPNSGVL VIQDEESKPT CCFGNCYDGE LKGLPFPQNA KLTVTYRTGT GNDRRSYHDQ VLFIPVLDQP YYSNRYYVIK
101: RRGKQSGGAS ASAKEEDRVP CCFCFSYVPE VKPQEADPYD IYQQFEVHQR KPSSGYYTAT SVAPNGIPPE FLKRKYWTVE YSNSQDFGLT DDAKGINTTL
201: RSKLPNDMNT SVVVGKWYVP FIFVKERDAK DQIKSSPYYS MTLKQRWEEV YSCVNVNYNQ KGGEVVVDVD VETQVVKLEG QETISRETSG GGFVWFSVLG
301: DERQDKKIGL GSVVVERMKW EEERFGWLNN GERSNIKRSE RFEGGSSHWK SYRCLVLIES FELKRMDGSL VLTYEFTHVD KLKSKWD

Arabidopsis Description

At1g13520 [Source:UniProtKB/TrEMBL;Acc:Q6NNH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.