Factsheet for Bra038594.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26357	Canola	mitochondrion	98.3	98.3
AT1G61600.1	Thale cress	cytosol	75.37	84.32
KRG93807	Soybean	mitochondrion, nucleus	40.13	46.55
PGSC0003DMT400026205	Potato	mitochondrion	35.46	41.96
Solyc02g089650.2.1	Tomato	mitochondrion	35.24	41.71
Bra026901.1-P	Field mustard	cytosol	33.12	41.05
Bra026902.1-P	Field mustard	cytosol	32.27	40.0
Bra016728.1-P	Field mustard	cytosol	32.48	39.64
GSMUA_Achr9P18410_001	Banana	cytosol	31.21	38.48
Bra019719.1-P	Field mustard	cytosol	31.0	38.32
GSMUA_Achr5P27360_001	Banana	mitochondrion	31.21	38.28
Bra016727.1-P	Field mustard	cytosol	31.42	38.14
GSMUA_Achr3P06220_001	Banana	cytosol	31.0	38.12
GSMUA_Achr5P27350_001	Banana	mitochondrion	31.0	37.63
Bra026900.1-P	Field mustard	cytosol	29.3	35.2
Os08t0413500-00	Rice	cytosol, plasma membrane	29.72	34.4
Os08t0413100-00	Rice	cytosol, plasma membrane	29.94	33.98
Os08t0413200-00	Rice	cytosol	30.15	33.73
Zm00001d050302_P001	Maize	cytosol, plastid	26.33	33.07
OQU80420	Sorghum	cytosol	25.27	32.08
EES09009	Sorghum	cytosol	30.15	32.05
TraesCS4A01G113900.1	Wheat	cytosol	25.27	30.36
TraesCS7D01G441700.1	Wheat	cytosol	29.3	30.26
Os08t0412700-01	Rice	cytosol, plasma membrane	24.2	30.16
Os08t0412800-01	Rice	plasma membrane	24.2	29.61
TraesCS4B01G190200.1	Wheat	cytosol	24.84	29.55
TraesCS4D01G191600.1	Wheat	cytosol	24.63	29.52

Protein Annotations

EnsemblPlants:Bra038594.1	EnsemblPlants:Bra038594.1-P	EnsemblPlantsGene:Bra038594	GO:GO:0005575	GO:GO:0016020	InterPro:DUF1262
PANTHER:PTHR31050	PANTHER:PTHR31050:SF3	PFAM:PF06880	SEG:seg	UniParc:UPI000253E7B3	UniProt:M4FBX8
MapMan:35.2	:	:	:	:	:

Description

AT1G61600 (E=1e-197) | unknown protein

Coordinates

chrScaffold000149:+:381263..382924

Molecular Weight (calculated)

54302.9 Da

IEP (calculated)

9.456

GRAVY (calculated)

-0.635

Length

471 amino acids

Sequence
(BLAST)

001: MYVTRTLSQF RKYQKTLSEE SPEGPFSGVL VITDEEAETD DTFCFGMCKR TKIEKLPFPQ DKILSVVHTD SSGNRDTSVK KVLFIPALDQ PLSSNRYYVV
101: HARGRHKGKV CVCSKEIEKG LCCFPDILHE KKPKPLDPRN IYQTVKINRH HDKTFFAKSM APDGTPPSFL KKKGWELRAS RSLHPRRPRE ALGLDDELRA
201: RLPEFGFSVS TIRSGSVIVG EWYCPFMFVK ENCSVSYQMK KSMFYRMTLS QYWERIYHCE NNNLGDTNDE NNDEDEGLVR VEANVLREAN YVKGIEAVKE
301: DKEGNGGFYW YIPVQGLRGR GERRRKTCSG SAVGLSFVVV ERMRRGMEEG GWVEGGRKVV RVERDEQIGV SRRDFRDLNG NNNREWRRFG CYVLVESFGL
401: RRADGVLLVK CLFRHTQRLR SQPKNDYSHI LLSTATSAAA SRKITLAENK IVMEEIETAA RNDRWCYPRL L

Best Arabidopsis Sequence Match ( AT1G61600.1 )
(BLAST)

001: MYVTRTLSQF RKYQKTLSEE SPEGPFSGVL VITDEEAETE DTFCFGMCTR TKIEKLPLPQ DKILSVVHLD SSGNRETSVK KVLFIPALDQ PLSSNRYYVV
101: HARGRHKGKV SVCSREIEKG VCCFPDILHD KKPKPLDPRN IYQTVKINRH HDRTFYAKSV APDGTPPTFL KKKGWELRTS RSLHPRRPRE ALGLDEELRA
201: RLPAFGFPVS TIRSGSVIVG EWYCPFMFVK ENCSVSQQMR KSMFYRITLS QYWERIYHCG NNDLDENNDE NEEEVVRVEA NVVREANYVK GMEAVKGEKE
301: GHGGFYWYRQ VQGPRGPGER RRKTGLRSPV GLSFVVVERM RRVMEEGGWV GGGRKVVRVE RDEPIRVCRR DGRNMNGNND RNWRRFGCYV LVESFGLRRA
401: DGVLLVKCVF RHTNRLRCNW E

Arabidopsis Description

DUF1262 family protein (DUF1262) [Source:UniProtKB/TrEMBL;Acc:Q9SY90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.