Factsheet for Bra026902.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26653	Canola	cytosol	92.11	98.31
AT1G13470.1	Thale cress	cytosol	76.32	76.52
Bra026901.1-P	Field mustard	cytosol	71.05	71.05
Bra016728.1-P	Field mustard	cytosol	68.95	67.88
Bra019719.1-P	Field mustard	cytosol	61.58	61.42
Bra016727.1-P	Field mustard	cytosol	62.63	61.34
Bra026900.1-P	Field mustard	cytosol	53.95	52.3
VIT_01s0011g02320.t01	Wine grape	cytosol	45.79	44.5
PGSC0003DMT400019462	Potato	cytosol	46.05	44.3
KRH71102	Soybean	cytosol	43.42	43.19
Solyc05g010460.2.1	Tomato	cytosol, nucleus, peroxisome	43.95	42.07
VIT_01s0011g02330.t01	Wine grape	cytosol, mitochondrion	43.68	42.03
Solyc05g010470.2.1	Tomato	cytosol	34.47	41.46
PGSC0003DMT400019458	Potato	cytosol	36.84	41.42
KRH71091	Soybean	cytosol	43.16	41.41
PGSC0003DMT400059315	Potato	cytosol	29.47	40.14
KRH63067	Soybean	cytosol, golgi, mitochondrion, nucleus	35.53	40.06
GSMUA_Achr5P27360_001	Banana	mitochondrion	38.95	38.54
GSMUA_Achr5P27350_001	Banana	mitochondrion	38.16	37.37
GSMUA_Achr3P06220_001	Banana	cytosol	37.63	37.34
Os08t0413500-00	Rice	cytosol, plasma membrane	38.95	36.36
Os08t0413200-00	Rice	cytosol	39.47	35.63
Os08t0413100-00	Rice	cytosol, plasma membrane	38.42	35.18
GSMUA_Achr9P18410_001	Banana	cytosol	35.26	35.08
Zm00001d050302_P001	Maize	cytosol, plastid	34.47	34.93
Os08t0412700-01	Rice	cytosol, plasma membrane	34.47	34.66
OQU80420	Sorghum	cytosol	32.37	33.15
TraesCS7D01G441700.1	Wheat	cytosol	39.47	32.89
TraesCS4B01G190200.1	Wheat	cytosol	34.21	32.83
TraesCS4A01G113900.1	Wheat	cytosol	33.42	32.4
Bra038594.1-P	Field mustard	nucleus	40.0	32.27
Os08t0412800-01	Rice	plasma membrane	32.63	32.21
TraesCS4D01G191600.1	Wheat	cytosol	33.16	32.06
EES09009	Sorghum	cytosol	36.58	31.38

Protein Annotations

EnsemblPlants:Bra026902.1	EnsemblPlants:Bra026902.1-P	EnsemblPlantsGene:Bra026902	InterPro:DUF1262	PANTHER:PTHR31050	PANTHER:PTHR31050:SF2
PFAM:PF06880	UniParc:UPI0002542EF5	UniProt:M4EDP2	MapMan:35.2	:	:

Description

AT1G13470 (E=1e-172) | unknown protein

Coordinates

chrA09:+:34211685..34212958

Molecular Weight (calculated)

43576.5 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.560

Length

380 amino acids

Sequence
(BLAST)

001: MYVTRRLSEY QRNRSEIKQP LPEGPNSGVL IIQDEESKPT CCFGSCYGSE LKGLPFPQNA KLTVNYIIAA NNTTIVYQDP VVFIPVLDQP LSSNRYYAIK
101: RSGKHSGEAS ANAKEEDRVP CCFCFTRVPE AKPQQADPYD IYQQFEIHQR KSLSRYYFAT SVAPDGVPPE FLKRKGWTVE YSTSEDYGLR DDAKGINAKL
201: RSELPSDLNI SVAVGNWYVP FIFVKDGDAK DQLKSSTYYR MTLYQKWEEV YSCENADKEN REVVLNMEVD PEVVKLEGQL IGKETIRVDE NGVVWFGVAN
301: KSVGLRSVVT ARMKWEEERF GWKSKAVVER TDRFDGGGSS WKSYKCYVLV ESFVLRRMDE SLVLTFEFKH ADKLKSKWES

Best Arabidopsis Sequence Match ( AT1G13470.1 )
(BLAST)

001: MYVTRRLSEY QRNRSELPES PNSGVLIIQD EESRPTCCFG SCYRATLKGL PFPQNANLIV SESRIFLNQT ITYIDPVVFI PVLDQPLSSN RYYVIKRGGK
101: HSGKASANAK EEDRVPCCFC FSYVPEAKPQ EADPNDIYQQ FQIHQKRSSS RYYTATSVAP NGKPPEFLKR KYWNAEYSTS EDFGLKDDAK GIYTEIRSEL
201: PSDFNTSVVV GKWYVPFIFV KEGNAKDQLK SSAYYSMILL QRWEEVYSCE NAYNENREVV VDVEVEPEVV KLEGQEIGKN TKRVDENGVF WFAVAEKRIG
301: LRSVVMERMK WEEERFGWKI EPQRAVVKKS ERFNGGGSNW KSYRCYVLVE SFELRRKDKS LVLTFEFKHV DKLRTKWES

Arabidopsis Description

Protein of unknown function (DUF1262) [Source:TAIR;Acc:AT1G13470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.